HDMD-package	HDMD-package
AA54	AA54
AAbyGroup	AminoAcids
AAGroups	AminoAcids
AAMetric	AAMetric
AAMetric.Atchley	AAMetric.Atchley
AminoAcids	AminoAcids
bHLH288	bHLH288
factor.pa.ginv	factor.pa.ginv
FactorTransform	FactorTransform
FactorTransform.default	FactorTransform
FactorTransform.vector	FactorTransform
HDMD	HDMD-package
hydrophobic	AminoAcids
Loadings.variation	Loadings.variation
MolecularEntropy	MolecularEntropy
MolecularMI	MolecularMI
NMI	NMI
pairwise.mahalanobis	pairwise.mahalanobis
polar	AminoAcids
Promax.only	Promax.only
small	AminoAcids
