RNV.compute.elements    Compute RNV and associated elements for all
                        enzymes _(Deprecated)_
RNV.delta.all.enz       Delta at RNV for all enzymes
RNV.for.simul           Compute RNV for simulation
RNV.graph.double.at.eq
                        Graph of e and RNV in relation to A at
                        equilibrium
RNV.mean.simul          Mean of RNV size in simulation
RNV.mean.suitability    Compare RNV mean in simulation with predicted
                        RNV at equilibrium
RNV.ranking.order.factor
                        Name and value of RNV-ranking-order factor
RNV.size.at.equilibr    Plot and linear model of RNV size at
                        equilibrium
SimEvolEnzCons          SimEvolEnzCons: Simulation of Enzyme Evolution
                        Under Constraints
activities              Activity computation
alpha_ij                Redistribution coefficient computation
apparent.activities.Aq
                        Apparent activity computation
class_group             Classify enzymes in regulation groups
coef_rep                Response coefficient computation
coef_sel.continue       Selection coefficient computation
coef_sel.discrete       Selection coefficient computation
compute.B.from.beta     Global co-regulation coefficient computation
compute.beta.from.B     Co-regulation coefficient computation
compute.delta           Computation of mutation actual effect
data_sim                Simulation results for each constraint
droites                 Line of relative enzyme concentrations
                        (co-regulations cases)
extract.tabEtot         Table of concentrations
flux                    Flux computation
flux.dome.graphics      Plot of the flux dome
flux.shape.for.all.points
                        Flux shape computing for all points
flux.shape.from.one.point
                        Flux shape computing from one point
flux.shape.from.one.point.graphics
                        Plots of flux shape computing from one point
graph.simul.conc.end    Graphics of simulation ends
graph.simul.triangle.diagram.e
                        Triangular diagram of relative concentrations
                        for simulations of enzyme evolution
group_types             Which types are the different regulation
                        groups?
is.B.accurate           Verification of B accuracy
is.beta.accurate        Verification of beta matrix accuracy
is.correl.authorized    Verification of constraint name
mut.E.direct            Direct mutation of enzyme concentrations
mut.E.indirect          Indirect mutation of enzyme concentrations
mut.E.old               Old method for mutation of enzyme
                        concentrations
mut.kin                 Mutation of kinetic parameters
name.correl             Help to name parameter 'correl'
odd.discrete.sel.coef   Equation of null coefficient selection
predict_eff             Prediction of effective equilibrium
predict_eff_allE0       Prediction of effective equilibrium for all
                        possible initial relative concentrations
predict_grp             Prediction of equilibrium with regulation
                        groups
predict_th              Prediction of theoretical equilibrium
range_delta             Bounds of _delta_i_
range_tau               Bounds of _tau_
search_group            Search the regulation group for an enzyme
simul.evol.enz.multiple
                        Multiple simulations of enzyme evolution
simul.evol.enz.one      Simulation of enzyme evolution
simul.evol.graph.methods
                        Graphic methods for simulations of enzyme
                        evolution
simul.next.resident     Time step simulation (next resident values)
sol_eqeff               Expression of null response coefficient
solv.2dg.polynom        Real solutions of quadratic equation
sumbis                  Sum of vector elements
