Pi3K_AKT_graph          PI3K/AKT activation
Pi3K_graph              PI3K Cascade
RAF_MAP_graph           #' RAF/MAP kinase cascade
TGFBeta_Smad_graph      TGF-beta receptor signaling activates SMADs
generate_expression     Generate Simulated Expression
graphsim-package        The graphsim package
make_adjmatrix          Generate Adjacency Matrix
make_commonlink         Generate Common Link Matrix
make_distance           Generate Distance Matrix
make_laplacian          Generate Laplacian Matrix
make_sigma              Generate Sigma (Sigma) Matrix
make_state              Make State Matrix
plot_directed           Extensions to igraph for Customising plots
