Package: liayson
Type: Package
Title: Linking Singe-Cell Transcriptomes Atween Contemporary
        Subpopulation Genomes
Version: 1.0.4
Date: 2021-06-17
Author: Noemi Andor
Maintainer: Noemi Andor <liayson.scRNA.R@gmail.com>
Description: Given an RNA-seq derived cell-by-gene matrix and an DNA-seq derived copy number segmentation, LIAYSON predicts the number of clones present in a tumor, their size, the copy number profile of each clone and the clone membership of each single cell (Andor, N. & Lau, B., et al. (2018) <doi:10.1101/445932>).
License: GPL-2
URL: https://github.com/noemiandor/liayson,
        https://groups.google.com/d/forum/liayson
Depends: R (>= 3.0)
Imports: phangorn, RColorBrewer, ape, parallel, plyr, matlab, biomaRt,
        distances, arules, e1071, proxy, gplots, methods
Suggests: mclust, fpc, NbClust, modeest, pastecs, vegan
Packaged: 2021-06-18 11:38:38 UTC; 4470246
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2021-06-21 06:50:04 UTC
RoxygenNote: 6.1.1
Built: R 4.0.2; ; 2021-06-22 10:59:48 UTC; unix
