Package: mizer
Title: Multi-Species sIZE Spectrum Modelling in R
Type: Package
Description: A set of classes and methods to set up and run multi-species, trait
    based and community size spectrum ecological models, focused on the marine
    environment.
Maintainer: Gustav Delius <gustav.delius@york.ac.uk>
Authors@R: c(person("Gustav", "Delius", email="gustav.delius@york.ac.uk",
                    role=c("cre", "aut", "cph"),
                    comment = c(ORCID = "0000-0003-4092-8228")),
             person("Finlay", "Scott", email="drfinlayscott@gmail.com", 
                    role=c("aut", "cph")),
             person("Julia", "Blanchard", email="julia.blanchard@utas.edu.au",
                    role=c("aut", "cph"),
                    comment = c(ORCID = "0000-0003-0532-4824")),
             person("Ken", "Andersen", email="kha@aqua.dtu.dk",
                    role=c("aut", "cph"),
                    comment = c(ORCID = "0000-0002-8478-3430")),
             person("Richard", "Southwell", email="richard.southwell@york.ac.uk",
                    role=c("ctb", "cph")))
Version: 2.3.0.1
License: GPL-3
Imports: assertthat, deSolve, dplyr, ggplot2, ggrepel, grid, lubridate,
        methods, plotly, plyr, progress, Rcpp, reshape2, rlang,
        lifecycle
LinkingTo: Rcpp
Depends: R (>= 3.1)
Suggests: testthat (>= 2.1.0), vdiffr, roxygen2, knitr, shinyBS,
        rmarkdown, pkgdown, covr, spelling
Collate: 'helpers.R' 'MizerParams-class.R' 'MizerSim-class.R'
        'reproduction.R' 'saveParams.R' 'species_params.R'
        'setColours.R' 'setInteraction.R' 'setPredKernel.R'
        'setSearchVolume.R' 'setMaxIntakeRate.R' 'setMetabolicRate.R'
        'setMetadata.R' 'setExtMort.R' 'setReproduction.R'
        'setResource.R' 'setFishing.R' 'setInitialValues.R'
        'setBevertonHolt.R' 'upgrade.R' 'selectivity_funcs.R'
        'pred_kernel_funcs.R' 'resource_dynamics.R' 'project.R'
        'mizer-package.R' 'project_methods.R' 'rate_functions.R'
        'summary_methods.R' 'plots.R' 'plotBiomassObservedVsModel.R'
        'plotYieldObservedVsModel.R' 'animateSpectra.R'
        'newMultispeciesParams.R' 'wrapper_functions.R'
        'newSingleSpeciesParams.R' 'steady.R' 'test-helpers.R'
        'extension.R' 'data.R' 'RcppExports.R' 'deprecated.R'
        'get_initial_n.R' 'compareParams.R' 'customFunction.R'
        'manipulate_species.R' 'calibrate.R' 'match.R'
RoxygenNote: 7.1.1
Encoding: UTF-8
LazyData: true
URL: https://sizespectrum.org/mizer/,
        https://github.com/sizespectrum/mizer
BugReports: https://github.com/sizespectrum/mizer/issues
Language: en-GB
RdMacros: lifecycle
NeedsCompilation: yes
Packaged: 2021-09-13 19:38:06 UTC; gustav
Author: Gustav Delius [cre, aut, cph] (<https://orcid.org/0000-0003-4092-8228>),
  Finlay Scott [aut, cph],
  Julia Blanchard [aut, cph] (<https://orcid.org/0000-0003-0532-4824>),
  Ken Andersen [aut, cph] (<https://orcid.org/0000-0002-8478-3430>),
  Richard Southwell [ctb, cph]
Repository: CRAN
Date/Publication: 2021-09-15 08:40:09 UTC
Built: R 4.0.2; x86_64-apple-darwin17.0; 2021-09-16 11:28:04 UTC; unix
Archs: mizer.so.dSYM
