calculate_expression_profile	calculate_expression_profile
calculate_expression_similarity_counts	calculate_expression_similarity_counts
calculate_expression_similarity_transcript	calculate_expression_similarity_transcript
calculate_first_minimum_density	calculate_first_minimum_density
calculate_noise_threshold	calculate_noise_threshold
calculate_noise_threshold_method_statistics	calculate_noise_threshold_method_statistics
cast_gtf_to_genes	cast_gtf_to_genes
cast_matrix_to_numeric	cast_matrix_to_numeric
filter_genes_transcript	filter_genes_transcript
get_methods_calculate_noise_threshold	get_methods_calculate_noise_threshold
get_methods_correlation_distance	get_methods_correlation_distance
noisyr	noisyr
noisyr_counts	noisyr_counts
noisyr_transcript	noisyr_transcript
optimise_window_length	optimise_window_length
plot_expression_similarity	plot_expression_similarity
remove_noise_from_bams	remove_noise_from_bams
remove_noise_from_matrix	remove_noise_from_matrix
