Package: phylosamp
Type: Package
Title: The Probability of Transmission Given Phylogenetic Linkage
Version: 0.1.6
Date: 2021-11-20
Authors@R: c(person("John R", "Giles", role=c("aut", "ctb"), email="jrgiles@uw.edu"),
              person("Shirlee", "Wohl", role=c("aut", "ctb"), email="swohl@jhu.edu"),
              person("Justin", "Lessler", role=c("aut", "cre"), email="jlessler@unc.edu"))
Maintainer: Justin Lessler <jlessler@unc.edu>
Description: Implements novel tools that estimate the probability of true transmission between two cases given 
    phylogenetic linkage and the expected number of true transmission links in a sample. Methods described in
    Wohl, Giles, and Lessler (2021) <doi:10.1371/journal.pcbi.1009182>.
License: GPL-2
URL: https://github.com/HopkinsIDD/phylosamp
BugReports: https://github.com/HopkinsIDD/phylosamp/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 2.10), stats
Imports: reshape2, ggplot2, cowplot, RColorBrewer
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-11-20 22:11:17 UTC; johngiles
Author: John R Giles [aut, ctb],
  Shirlee Wohl [aut, ctb],
  Justin Lessler [aut, cre]
Repository: CRAN
Date/Publication: 2021-11-22 09:40:02 UTC
Built: R 4.0.2; ; 2021-11-23 12:22:12 UTC; unix
