Package: spruce
Type: Package
Title: Spatial Random Effects Clustering of Single Cell Data
Version: 0.99.1
Authors@R: 
    c(person(given = "Carter",
           family = "Allen",
           role = c("aut", "cre"),
           email = "carter.allen12@gmail.com",
           comment = c(ORCID = "0000-0001-6937-7234")),
     person(given = "Dongjun",
           family = "Chung",
           role = c("aut")))
Date: 2022-02-17
Description: Allows for identification of cell sub-populations within tissue samples using
  Bayesian multivariate mixture models with spatial random effects to account for a wide range of 
  spatial gene expression patterns, as described in Allen et. al, 2021 <doi:10.1101/2021.06.23.449615>.
  Bayesian inference is conducted using efficient Gibbs sampling implemented using 'Rcpp'.
License: GPL (>= 2)
Imports: Rcpp, mvtnorm, BayesLogit, truncnorm, stats, igraph, MCMCpack,
        patchwork, tidyr, dplyr, ggplot2, tidyselect, Seurat, rlang
RoxygenNote: 7.1.2
LinkingTo: Rcpp, RcppArmadillo
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.0)
NeedsCompilation: yes
Packaged: 2022-02-19 00:28:22 UTC; carterallen
Author: Carter Allen [aut, cre] (<https://orcid.org/0000-0001-6937-7234>),
  Dongjun Chung [aut]
Maintainer: Carter Allen <carter.allen12@gmail.com>
Repository: CRAN
Date/Publication: 2022-02-21 08:50:02 UTC
Built: R 4.0.5; x86_64-apple-darwin17.0; 2022-02-22 12:21:50 UTC; unix
Archs: spruce.so.dSYM
