amm2tibble              convert an ancestry-matching matrix to a
                        ggplot-able tibble
compile_related_pairs   compile pairwise relationships from the samples
count_and_plot_ancestry_matrices
                        Count up the number of different kinds of
                        related pairs and make a plot
count_and_plot_mate_distribution
                        Count and plot the number of mates each
                        individuals has produced offspring with
downsample_pairs        downsample the number of individuals sampled
example_amms            a list of examples of ancestry-match matrices
ggplot_census_by_year_age_sex
                        Just a simple plot function
half_first_cousin_amm   A half-first cousin ancestry match matrix
install_spip            Download the spip binary and install it where
                        CKMRpop expects it
leslie_from_spip        Return a Leslie-like matrix from the spip
                        parameters
plot_amm_from_matrix    plot an ancestry matrix (or multiple such
                        matrices) from its (their) matrix form
plot_conn_comps         plot the graph showing the connected components
relationship_zone_names
                        relationship zone names
relationship_zone_perimeters
                        Return the perimeters of all the relationship
                        zones
run_spip                Run spip in a user-specified directory
slurp_spip              Read in the pedigree, census, and sampling
                        information from the spip run
species_1_life_history
                        a list of life-history / life-table data for a
                        hypothetical species
species_1_slurped_results
                        The result of running spip in the
                        species_1_simulation vignette.
species_1_slurped_results_100_loci
                        The result of running spip in the
                        species_1_simulation vignette with 100 loci.
species_1_slurped_results_1gen
                        The result of running spip in the
                        species_1_simulation vignette and slurping out
                        with num_generations = 1.
species_2_life_history
                        a list of life-history / life-table data for
                        another hypothetical species
spip_exists             return TRUE if spip exists where it should be
                        installed.
spip_help               print the abbreviated usage information from
                        spip
spip_help_full          print the full usage information from spip
summarize_offspring_and_mate_numbers
                        Summarize the distribution of number of
                        offspring and number of mates
summarize_survival_from_census
                        Summarize annual sex-and-age-specific survival
                        rates from the census information
three_pops_no_mig_slurped_results
                        The result of running spip and slurping the
                        output in the three population case with no
                        migration
three_pops_with_mig_slurped_results
                        The result of running spip and slurping the
                        output in the three population case with
                        migration
uncooked_spaghetti      Summarise kin-pair information and use it to
                        create uncooked spaghetti plots
