check                   Check consistency of flowdef and flowmat
check_args              Assert none of the arguments of a function are
                        null.
fetch                   Two generic functions to search for pipelines
                        and configuration files.
flow-class              Describing the flow class
flowopts                Default options/params used in flowr and
                        ngsflows
get_resources           Extract resources used by each job of a flow
                        get_resources currently this only works on LSF
get_wds                 Get all the (sub)directories in a folder
job                     Describing details of the job object
kill                    Kill all jobs submitted to the computing
                        platform, for one or multiple flows
plot_flow               Plot a clean and scalable flowchart describing
                        the (work)flow
queue-class             A 'queue' object defines details regarding how
                        a job is submitted
rerun                   Re-run a pipeline in case of hardware or
                        software failures.
run                     Run automated Pipelines
run_pipe_v2             Run automated Pipelines
setup                   Setup and initialize flowr
status                  Monitor status of flow(s)
submit_flow             Submit a flow to the cluster
submit_job              Submit a step of a flow
submit_run              Submit several flow objects, limit the max
                        running concurrently
test_queue              test_queue
to_df.status            to_df.status
to_flow                 Create flow objects
to_flowdef              Flow Definition defines how to stitch steps
                        into a (work)flow.
to_flowdet              Create a flow's submission detail file
to_flowmat              Create a flowmat using a list a commands.
verbose                 Verbose levels, defining verboseness of
                        messages
whisker_render          Wrapper around whisker.render with some
                        additional checks
write_flow_details      Write files describing this flow
