********************************************************************************
MEME - Motif discovery tool
********************************************************************************
MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey and Charles Elkan,
"Fitting a mixture model by expectation maximization to
discover motifs in biopolymers",
Proceedings of the Second International Conference on Intelligent Systems
for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.
********************************************************************************


********************************************************************************
TRAINING SET
********************************************************************************
PRIMARY SEQUENCES= ara.fa
CONTROL SEQUENCES= --none--
ALPHABET= ACDEFGHIKLMNPQRSTVWY
Sequence name            Weight Length  Sequence name            Weight Length  
-------------            ------ ------  -------------            ------ ------  
AT1G16060.1              1.0000    345  AT1G16060.2              1.0000    275  
AT1G51190.1              1.0000    568  AT1G72570.1              1.0000    415  
AT1G79700.1              1.0000    303  AT1G79700.2              1.0000    313  
AT2G28550.1              1.0000    449  AT2G28550.2              1.0000    381  
AT2G28550.3              1.0000    464  AT2G39250.1              1.0000    325  
AT2G41710.1              1.0000    423  AT2G41710.2              1.0000    428  
AT2G41710.3              1.0000    458  AT3G20840.1              1.0000    574  
AT3G54320.1              1.0000    438  AT3G54320.3              1.0000    430  
AT3G54990.1              1.0000    346  AT3G54990.2              1.0000    247  
AT4G36920.1              1.0000    432  AT4G36920.2              1.0000    432  
AT4G37750.1              1.0000    555  AT5G10510.1              1.0000    569  
AT5G10510.2              1.0000    581  AT5G10510.3              1.0000    604  
AT5G17430.1              1.0000    584  AT5G57390.1              1.0000    558  
AT5G60120.1              1.0000    485  AT5G60120.2              1.0000    507  
AT5G65510.1              1.0000    498  AT5G67180.1              1.0000    352  
********************************************************************************

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COMMAND LINE SUMMARY
********************************************************************************
This information can also be useful in the event you wish to report a
problem with the MEME software.

command: meme ara.fa -protein -o meme_out -mod zoops -nmotifs 10 -minw 4 -maxw 7 -objfun classic -markov_order 0 

model:  mod=         zoops    nmotifs=        10    evt=           inf
objective function:           em=       E-value of product of p-values
                              starts=   E-value of product of p-values
width:  minw=            4    maxw=            7
nsites: minsites=        2    maxsites=       30    wnsites=       0.8
theta:  spmap=         pam    spfuzz=        120
em:     prior=       megap    b=           66695    maxiter=        50
        distance=    1e-05
trim:   wg=             11    ws=              1    endgaps=       yes
data:   n=           13339    N=              30
sample: seed=            0    hsfrac=          0
        searchsize=  13339    norand=         no    csites=       1000
Dirichlet mixture priors file: prior30.plib
Letter frequencies in dataset:
A 0.0767 C 0.0106 D 0.0543 E 0.0626 F 0.0397 G 0.0771 H 0.0316 I 0.0347 K 0.048 
L 0.065 M 0.0196 N 0.063 P 0.0463 Q 0.0461 R 0.0608 S 0.11 T 0.0568 V 0.0453 
W 0.0136 Y 0.0381 
Background letter frequencies (from file dataset with add-one prior applied):
A 0.0767 C 0.0106 D 0.0543 E 0.0626 F 0.0397 G 0.0771 H 0.0316 I 0.0347 K 0.048 
L 0.065 M 0.0196 N 0.063 P 0.0463 Q 0.0461 R 0.0608 S 0.11 T 0.0567 V 0.0453 
W 0.0136 Y 0.0381 
Background model order: 0
********************************************************************************


********************************************************************************
MOTIF RYEAHJW MEME-1	width =   7  sites =  30  llr = 595  E-value = 2.6e-138
********************************************************************************
--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 Description
--------------------------------------------------------------------------------
Simplified        A  :::6:::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  ::a::::
                  F  :1:::::
                  G  :::::::
                  H  ::::a::
                  I  :::::4:
                  K  :::::::
                  L  :::::6:
                  M  :::::::
                  N  :::::::
                  P  :::::::
                  Q  :::::::
                  R  a::::::
                  S  :::4:::
                  T  :::::::
                  V  :::::::
                  W  :4::::a
                  Y  :5:::::

         bits    6.6        
                 5.9       *
                 5.2       *
                 4.6     * *
Relative         3.9 *** * *
Entropy          3.3 *** ***
(28.6 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           RYEAHLW
consensus             W S I 
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G67180.1                 108  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT5G65510.1                 243  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQA
AT5G60120.2                 172  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT5G60120.1                 172  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT5G57390.1                 215  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQS
AT5G17430.1                 222  7.32e-10 RGVTRHRWTG RYEAHLW DNSCKREGQT
AT5G10510.3                 280  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQA
AT5G10510.2                 280  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQA
AT5G10510.1                 265  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQA
AT4G37750.1                 295  7.32e-10 RGVTRHRWTG RYEAHLW DNSFKKEGHS
AT4G36920.2                 143  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT4G36920.1                 143  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT3G54990.2                 134  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT3G54990.1                 134  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT3G20840.1                 193  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQS
AT2G41710.3                 117  7.32e-10 EEMSRHRWTG RYEAHLW DKSTWNQNQN
AT2G41710.2                  82  7.32e-10 RGVTRHRWTG RYEAHLW DKSTWNQNQN
AT2G41710.1                  82  7.32e-10 RGVTRHRWTG RYEAHLW DKSTWNQNQN
AT2G39250.1                 120  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT2G28550.3                 165  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT2G28550.2                 165  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT2G28550.1                 165  7.32e-10 RGVTFYRRTG RWESHIW DCGKQVYLGG
AT1G79700.2                  64  7.32e-10 RGVTRHRWTG RYEAHLW DKNSWNDTQT
AT1G79700.1                  64  7.32e-10 RGVTRHRWTG RYEAHLW DKNSWNDTQT
AT1G72570.1                 235  7.32e-10 RGVTRHRWTG RYEAHLW DNSCKKEGQT
AT1G51190.1                 202  7.32e-10 RGVTRHRWTG RYEAHLW DNSCRREGQS
AT1G16060.1                  70  7.32e-10 RGVTRHRWTG RYEAHLW DKNSWNETQT
AT3G54320.3                  77  2.07e-09 RGVTRHRWTG RFEAHLW DKSSWNSIQN
AT3G54320.1                  77  2.07e-09 RGVTRHRWTG RFEAHLW DKSSWNSIQN
AT1G16060.2                 102  3.33e-07 RGVAKHHHNG RWEARIG RVFGNKYLYL
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G67180.1                       7.3e-10  107_[1]_238
AT5G65510.1                       7.3e-10  242_[1]_249
AT5G60120.2                       7.3e-10  171_[1]_329
AT5G60120.1                       7.3e-10  171_[1]_307
AT5G57390.1                       7.3e-10  214_[1]_337
AT5G17430.1                       7.3e-10  221_[1]_356
AT5G10510.3                       7.3e-10  279_[1]_318
AT5G10510.2                       7.3e-10  279_[1]_295
AT5G10510.1                       7.3e-10  264_[1]_298
AT4G37750.1                       7.3e-10  294_[1]_254
AT4G36920.2                       7.3e-10  142_[1]_283
AT4G36920.1                       7.3e-10  142_[1]_283
AT3G54990.2                       7.3e-10  133_[1]_107
AT3G54990.1                       7.3e-10  133_[1]_206
AT3G20840.1                       7.3e-10  192_[1]_375
AT2G41710.3                       7.3e-10  116_[1]_335
AT2G41710.2                       7.3e-10  81_[1]_340
AT2G41710.1                       7.3e-10  81_[1]_335
AT2G39250.1                       7.3e-10  119_[1]_199
AT2G28550.3                       7.3e-10  164_[1]_293
AT2G28550.2                       7.3e-10  164_[1]_210
AT2G28550.1                       7.3e-10  164_[1]_278
AT1G79700.2                       7.3e-10  63_[1]_243
AT1G79700.1                       7.3e-10  63_[1]_233
AT1G72570.1                       7.3e-10  234_[1]_174
AT1G51190.1                       7.3e-10  201_[1]_360
AT1G16060.1                       7.3e-10  69_[1]_269
AT3G54320.3                       2.1e-09  76_[1]_347
AT3G54320.1                       2.1e-09  76_[1]_355
AT1G16060.2                       3.3e-07  101_[1]_167
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF RYEAHJW width=7 seqs=30
AT5G67180.1              (  108) RWESHIW  1 
AT5G65510.1              (  243) RYEAHLW  1 
AT5G60120.2              (  172) RWESHIW  1 
AT5G60120.1              (  172) RWESHIW  1 
AT5G57390.1              (  215) RYEAHLW  1 
AT5G17430.1              (  222) RYEAHLW  1 
AT5G10510.3              (  280) RYEAHLW  1 
AT5G10510.2              (  280) RYEAHLW  1 
AT5G10510.1              (  265) RYEAHLW  1 
AT4G37750.1              (  295) RYEAHLW  1 
AT4G36920.2              (  143) RWESHIW  1 
AT4G36920.1              (  143) RWESHIW  1 
AT3G54990.2              (  134) RWESHIW  1 
AT3G54990.1              (  134) RWESHIW  1 
AT3G20840.1              (  193) RYEAHLW  1 
AT2G41710.3              (  117) RYEAHLW  1 
AT2G41710.2              (   82) RYEAHLW  1 
AT2G41710.1              (   82) RYEAHLW  1 
AT2G39250.1              (  120) RWESHIW  1 
AT2G28550.3              (  165) RWESHIW  1 
AT2G28550.2              (  165) RWESHIW  1 
AT2G28550.1              (  165) RWESHIW  1 
AT1G79700.2              (   64) RYEAHLW  1 
AT1G79700.1              (   64) RYEAHLW  1 
AT1G72570.1              (  235) RYEAHLW  1 
AT1G51190.1              (  202) RYEAHLW  1 
AT1G16060.1              (   70) RYEAHLW  1 
AT3G54320.3              (   77) RFEAHLW  1 
AT3G54320.1              (   77) RFEAHLW  1 
AT1G16060.2              (  102) RWEARIG  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 2.6e-138 
  -580   -418   -638   -663   -657   -611   -464   -561   -339   -572   -569   -592   -558   -482    401   -652   -590   -634   -513   -634 
  -667   -460   -705   -712     95   -706   -357   -483   -626   -447   -464   -599   -669   -572   -615   -675   -617   -510    481    378 
  -523   -492   -241    395   -614   -559   -513   -481   -552   -589   -541   -490   -639   -412   -596   -625   -552   -522   -583   -619 
   301   -263   -659   -665   -628   -399   -649   -561   -652   -594   -522   -589   -507   -592   -640    170   -373   -419   -638   -682 
  -637   -487   -559   -613   -519   -634    491   -629   -584   -570   -528   -456   -611   -391    -89   -619   -574   -603   -524   -391 
  -570   -424   -851   -790   -307   -800   -706    347   -741    318   -173   -815   -705   -647   -736   -817   -554   -245   -496   -539 
  -462   -306   -469   -476   -188   -222   -447   -387   -427   -270   -315   -486   -493   -433   -435   -530   -451   -363    608   -237 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 2.6e-138 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.066667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.400000  0.533333 
 0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.633333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.366667  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.400000  0.000000  0.600000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RYEAHJW MEME-1 regular expression
--------------------------------------------------------------------------------
R[YW]E[AS]H[LI]W
--------------------------------------------------------------------------------




Time  3.99 secs.

********************************************************************************


********************************************************************************
MOTIF YRGVTRH MEME-2	width =   7  sites =  30  llr = 569  E-value = 1.3e-124
********************************************************************************
--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 Description
--------------------------------------------------------------------------------
Simplified        A  :::::::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  :::::::
                  F  :::::2:
                  G  ::a::::
                  H  ::::::8
                  I  :::::::
                  K  :::::::
                  L  :::::2:
                  M  :::::::
                  N  :::::::
                  P  :::::::
                  Q  :::::::
                  R  :a:::6:
                  S  :::::::
                  T  ::::a::
                  V  :::a:::
                  W  :::::::
                  Y  a:::::2

         bits    6.6        
                 5.9        
                 5.2        
                 4.6 *  *   
Relative         3.9 ***** *
Entropy          3.3 ***** *
(27.3 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           YRGVTRH
consensus                 L 
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 334  8.81e-10 SSGFSRGASI YRGVTRH HQQGRWQARI
AT5G57390.1                 306  8.81e-10 SSGFSRGASM YRGVTRH HQHGRWQARI
AT5G17430.1                 211  8.81e-10 IESFGQRTSI YRGVTRH RWTGRYEAHL
AT5G10510.3                 391  8.81e-10 SSGFSRGASI YRGVTRH HQQGRWQARI
AT5G10510.2                 368  8.81e-10 SSGFSRGASI YRGVTRH HQQGRWQARI
AT5G10510.1                 356  8.81e-10 SSGFSRGASI YRGVTRH HQQGRWQARI
AT4G37750.1                 386  8.81e-10 SSGFSRGASI YRGVTRH HQHGRWQARI
AT3G54320.3                  66  8.81e-10 SPASTRRSSI YRGVTRH RWTGRFEAHL
AT3G54320.1                  66  8.81e-10 SPASTRRSSI YRGVTRH RWTGRFEAHL
AT3G20840.1                 284  8.81e-10 SSGFSRGASM YRGVTRH HQHGRWQARI
AT2G41710.2                  71  8.81e-10 PCTAGKRSSI YRGVTRH RWTGRYEAHL
AT2G41710.1                  71  8.81e-10 PCTAGKRSSI YRGVTRH RWTGRYEAHL
AT1G79700.2                  53  8.81e-10 RNAPLQRSSP YRGVTRH RWTGRYEAHL
AT1G79700.1                  53  8.81e-10 RNAPLQRSSP YRGVTRH RWTGRYEAHL
AT1G72570.1                 326  8.81e-10 SSGFSRGASV YRGVTRH HQHGRWQARI
AT1G51190.1                 293  8.81e-10 SSGFSRGASM YRGVTRH HQHGRWQARI
AT5G67180.1                 189  2.40e-09 STGFPRGSSK YRGVTLH KCGRWESRLG
AT4G36920.2                 224  2.40e-09 STGFPRGSSK YRGVTLH KCGRWEARMG
AT4G36920.1                 224  2.40e-09 STGFPRGSSK YRGVTLH KCGRWEARMG
AT2G28550.3                 246  2.40e-09 STGFSRGSSK YRGVTLH KCGRWEARMG
AT2G28550.2                 246  2.40e-09 STGFSRGSSK YRGVTLH KCGRWEARMG
AT2G28550.1                 246  2.40e-09 STGFSRGSSK YRGVTLH KCGRWEARMG
AT5G60120.2                 161  4.85e-09 RRGPRSKSSQ YRGVTFY RRTGRWESHI
AT5G60120.1                 161  4.85e-09 RRGPRSKSSQ YRGVTFY RRTGRWESHI
AT3G54990.2                 123  4.85e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT3G54990.1                 123  4.85e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT2G39250.1                 109  4.85e-09 RRGPRSRSSH YRGVTFY RRTGRWESHI
AT2G41710.3                  71  7.83e-09 PCTAGKRSSI YRGVTRF GCELGVVLSV
AT1G16060.1                  59  7.83e-09 RDAPPQRSSV HRGVTRH RWTGRYEAHL
AT1G16060.2                  91  3.33e-08 SSGFSRGVSK YRGVAKH HHNGRWEARI
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       8.8e-10  333_[2]_158
AT5G57390.1                       8.8e-10  305_[2]_246
AT5G17430.1                       8.8e-10  210_[2]_367
AT5G10510.3                       8.8e-10  390_[2]_207
AT5G10510.2                       8.8e-10  367_[2]_207
AT5G10510.1                       8.8e-10  355_[2]_207
AT4G37750.1                       8.8e-10  385_[2]_163
AT3G54320.3                       8.8e-10  65_[2]_358
AT3G54320.1                       8.8e-10  65_[2]_366
AT3G20840.1                       8.8e-10  283_[2]_284
AT2G41710.2                       8.8e-10  70_[2]_351
AT2G41710.1                       8.8e-10  70_[2]_346
AT1G79700.2                       8.8e-10  52_[2]_254
AT1G79700.1                       8.8e-10  52_[2]_244
AT1G72570.1                       8.8e-10  325_[2]_83
AT1G51190.1                       8.8e-10  292_[2]_269
AT5G67180.1                       2.4e-09  188_[2]_157
AT4G36920.2                       2.4e-09  223_[2]_202
AT4G36920.1                       2.4e-09  223_[2]_202
AT2G28550.3                       2.4e-09  245_[2]_212
AT2G28550.2                       2.4e-09  245_[2]_129
AT2G28550.1                       2.4e-09  245_[2]_197
AT5G60120.2                       4.9e-09  160_[2]_340
AT5G60120.1                       4.9e-09  160_[2]_318
AT3G54990.2                       4.9e-09  122_[2]_118
AT3G54990.1                       4.9e-09  122_[2]_217
AT2G39250.1                       4.9e-09  108_[2]_210
AT2G41710.3                       7.8e-09  70_[2]_381
AT1G16060.1                       7.8e-09  58_[2]_280
AT1G16060.2                       3.3e-08  90_[2]_178
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF YRGVTRH width=7 seqs=30
AT5G65510.1              (  334) YRGVTRH  1 
AT5G57390.1              (  306) YRGVTRH  1 
AT5G17430.1              (  211) YRGVTRH  1 
AT5G10510.3              (  391) YRGVTRH  1 
AT5G10510.2              (  368) YRGVTRH  1 
AT5G10510.1              (  356) YRGVTRH  1 
AT4G37750.1              (  386) YRGVTRH  1 
AT3G54320.3              (   66) YRGVTRH  1 
AT3G54320.1              (   66) YRGVTRH  1 
AT3G20840.1              (  284) YRGVTRH  1 
AT2G41710.2              (   71) YRGVTRH  1 
AT2G41710.1              (   71) YRGVTRH  1 
AT1G79700.2              (   53) YRGVTRH  1 
AT1G79700.1              (   53) YRGVTRH  1 
AT1G72570.1              (  326) YRGVTRH  1 
AT1G51190.1              (  293) YRGVTRH  1 
AT5G67180.1              (  189) YRGVTLH  1 
AT4G36920.2              (  224) YRGVTLH  1 
AT4G36920.1              (  224) YRGVTLH  1 
AT2G28550.3              (  246) YRGVTLH  1 
AT2G28550.2              (  246) YRGVTLH  1 
AT2G28550.1              (  246) YRGVTLH  1 
AT5G60120.2              (  161) YRGVTFY  1 
AT5G60120.1              (  161) YRGVTFY  1 
AT3G54990.2              (  123) YRGVTFY  1 
AT3G54990.1              (  123) YRGVTFY  1 
AT2G39250.1              (  109) YRGVTFY  1 
AT2G41710.3              (   71) YRGVTRF  1 
AT1G16060.1              (   59) HRGVTRH  1 
AT1G16060.2              (   91) YRGVAKH  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 1.3e-124 
  -693   -489   -719   -738   -199   -711     11   -521   -654   -485   -503   -631   -684   -606   -644   -705   -647   -548   -278    463 
  -580   -418   -638   -663   -657   -611   -464   -561   -339   -572   -569   -592   -558   -482    401   -652   -590   -634   -513   -634 
  -526   -526   -572   -646   -705    368   -639   -675   -598   -704   -652   -591   -639   -671   -632   -625   -644   -646   -631   -694 
  -643   -519   -777   -836   -671   -720   -774   -331   -790   -535   -566   -828   -724   -813   -804   -815   -651    445   -730   -755 
   -95   -292   -592   -621   -584   -459   -589   -449   -541   -549   -442   -495   -524   -535   -574   -331    403   -392   -589   -635 
  -474   -441   -574   -429    197   -562   -370   -360      8    155   -326   -459   -554   -295    322   -532   -437   -403   -421   -340 
  -630   -436   -621   -646     14   -670    459   -475   -595   -436   -441   -505   -630   -457   -542   -624   -572   -495   -240    218 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 1.3e-124 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000 
 0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.166667  0.000000  0.000000  0.000000  0.033333  0.200000  0.000000  0.000000  0.000000  0.000000  0.600000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.800000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.166667 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-2 regular expression
--------------------------------------------------------------------------------
YRGVT[RL]H
--------------------------------------------------------------------------------




Time  7.72 secs.

********************************************************************************


********************************************************************************
MOTIF GKQVYLG MEME-3	width =   7  sites =  30  llr = 550  E-value = 1.2e-115
********************************************************************************
--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 Description
--------------------------------------------------------------------------------
Simplified        A  :::::::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  :::::::
                  F  :::::::
                  G  9:::::a
                  H  :::::::
                  I  :::::::
                  K  :6:::::
                  L  :::::a:
                  M  :::::::
                  N  :::::::
                  P  :::::::
                  Q  ::9::::
                  R  :4:::::
                  S  :::::::
                  T  :::::::
                  V  :::a:::
                  W  :::::::
                  Y  ::::a::

         bits    6.6        
                 5.9        
                 5.2        
                 4.6     *  
Relative         3.9   **** 
Entropy          3.3 *******
(26.5 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           GKQVYLG
consensus             R     
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G67180.1                 117  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT5G60120.2                 181  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT5G60120.1                 181  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT4G36920.2                 152  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT4G36920.1                 152  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT3G54990.2                 143  1.48e-09 GRWESHIWDC GKQVYLG GFDTAYAAAR
AT3G54990.1                 143  1.48e-09 GRWESHIWDC GKQVYLG GFDTAYAAAR
AT3G54320.3                  96  1.48e-09 SSWNSIQNKK GKQVYLG AYDSEEAAAH
AT3G54320.1                  96  1.48e-09 SSWNSIQNKK GKQVYLG AYDSEEAAAH
AT2G41710.3                 136  1.48e-09 STWNQNQNKK GKQVYLG AYDDEEAAAR
AT2G41710.2                 101  1.48e-09 STWNQNQNKK GKQVYLG AYDDEEAAAR
AT2G41710.1                 101  1.48e-09 STWNQNQNKK GKQVYLG AYDDEEAAAR
AT2G39250.1                 129  1.48e-09 GRWESHIWDC GKQVYLG GFDTAYTAAR
AT2G28550.3                 174  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT2G28550.2                 174  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT2G28550.1                 174  1.48e-09 GRWESHIWDC GKQVYLG GFDTAHAAAR
AT5G65510.1                 262  3.34e-09 SCRREGQARK GRQVYLG GYDKEDRAAR
AT5G57390.1                 234  3.34e-09 SCRREGQSRK GRQVYLG GYDKEDKAAR
AT5G17430.1                 241  3.34e-09 SCKREGQTRK GRQVYLG GYDKEEKAAR
AT5G10510.1                 284  3.34e-09 SCRREGQARK GRQVYLG GYDKEDKAAR
AT4G37750.1                 314  3.34e-09 SFKKEGHSRK GRQVYLG GYDMEEKAAR
AT3G20840.1                 212  3.34e-09 SCRREGQSRK GRQVYLG GYDKEDKAAR
AT1G79700.2                  83  3.34e-09 NSWNDTQTKK GRQVYLG AYDEEEAAAR
AT1G79700.1                  83  3.34e-09 NSWNDTQTKK GRQVYLG AYDEEEAAAR
AT1G72570.1                 254  3.34e-09 SCKKEGQTRR GRQVYLG GYDEEEKAAR
AT1G51190.1                 221  3.34e-09 SCRREGQSRK GRQVYLG GYDKEEKAAR
AT1G16060.1                  89  3.34e-09 NSWNETQTKK GRQVYLG AYDEEDAAAR
AT1G16060.2                  19  9.19e-07 TMLTGIMADS SRAVYLG AYDEEDAAAR
AT5G10510.3                 299  3.52e-06 SCRREGQARK GRQVFYS FFGMCYLIWG
AT5G10510.2                 390  5.63e-06 WQARIGRVAG NKDLYLG TFATEEEAAE
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G67180.1                       1.5e-09  116_[3]_229
AT5G60120.2                       1.5e-09  180_[3]_320
AT5G60120.1                       1.5e-09  180_[3]_298
AT4G36920.2                       1.5e-09  151_[3]_274
AT4G36920.1                       1.5e-09  151_[3]_274
AT3G54990.2                       1.5e-09  142_[3]_98
AT3G54990.1                       1.5e-09  142_[3]_197
AT3G54320.3                       1.5e-09  95_[3]_328
AT3G54320.1                       1.5e-09  95_[3]_336
AT2G41710.3                       1.5e-09  135_[3]_316
AT2G41710.2                       1.5e-09  100_[3]_321
AT2G41710.1                       1.5e-09  100_[3]_316
AT2G39250.1                       1.5e-09  128_[3]_190
AT2G28550.3                       1.5e-09  173_[3]_284
AT2G28550.2                       1.5e-09  173_[3]_201
AT2G28550.1                       1.5e-09  173_[3]_269
AT5G65510.1                       3.3e-09  261_[3]_230
AT5G57390.1                       3.3e-09  233_[3]_318
AT5G17430.1                       3.3e-09  240_[3]_337
AT5G10510.1                       3.3e-09  283_[3]_279
AT4G37750.1                       3.3e-09  313_[3]_235
AT3G20840.1                       3.3e-09  211_[3]_356
AT1G79700.2                       3.3e-09  82_[3]_224
AT1G79700.1                       3.3e-09  82_[3]_214
AT1G72570.1                       3.3e-09  253_[3]_155
AT1G51190.1                       3.3e-09  220_[3]_341
AT1G16060.1                       3.3e-09  88_[3]_250
AT1G16060.2                       9.2e-07  18_[3]_250
AT5G10510.3                       3.5e-06  298_[3]_299
AT5G10510.2                       5.6e-06  389_[3]_185
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF GKQVYLG width=7 seqs=30
AT5G67180.1              (  117) GKQVYLG  1 
AT5G60120.2              (  181) GKQVYLG  1 
AT5G60120.1              (  181) GKQVYLG  1 
AT4G36920.2              (  152) GKQVYLG  1 
AT4G36920.1              (  152) GKQVYLG  1 
AT3G54990.2              (  143) GKQVYLG  1 
AT3G54990.1              (  143) GKQVYLG  1 
AT3G54320.3              (   96) GKQVYLG  1 
AT3G54320.1              (   96) GKQVYLG  1 
AT2G41710.3              (  136) GKQVYLG  1 
AT2G41710.2              (  101) GKQVYLG  1 
AT2G41710.1              (  101) GKQVYLG  1 
AT2G39250.1              (  129) GKQVYLG  1 
AT2G28550.3              (  174) GKQVYLG  1 
AT2G28550.2              (  174) GKQVYLG  1 
AT2G28550.1              (  174) GKQVYLG  1 
AT5G65510.1              (  262) GRQVYLG  1 
AT5G57390.1              (  234) GRQVYLG  1 
AT5G17430.1              (  241) GRQVYLG  1 
AT5G10510.1              (  284) GRQVYLG  1 
AT4G37750.1              (  314) GRQVYLG  1 
AT3G20840.1              (  212) GRQVYLG  1 
AT1G79700.2              (   83) GRQVYLG  1 
AT1G79700.1              (   83) GRQVYLG  1 
AT1G72570.1              (  254) GRQVYLG  1 
AT1G51190.1              (  221) GRQVYLG  1 
AT1G16060.1              (   89) GRQVYLG  1 
AT1G16060.2              (   19) SRAVYLG  1 
AT5G10510.3              (  299) GRQVFYS  1 
AT5G10510.2              (  390) NKDLYLG  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 1.2e-115 
  -266   -311   -321   -390   -495    354   -414   -430   -344   -494   -399   -147   -440   -434   -389   -215   -406   -399   -423   -474 
  -469   -468   -557   -405   -638   -544   -367   -469    351   -455   -411   -441   -543   -270    277   -518   -429   -459   -522   -521 
  -185   -256   -182   -153   -437   -463    -90   -322   -274   -262   -165   -312   -344    420   -262   -382   -323   -331   -332   -441 
  -437   -332   -702   -679   -454   -702   -704    -91   -649    -72   -313   -710   -654   -691   -698   -697   -444    435   -646   -615 
  -672   -466   -709   -718     16   -707   -365   -489   -632   -454   -471   -606   -673   -579   -621   -681   -624   -517   -246    462 
  -528   -394   -678   -619   -280   -670   -532   -200   -565    384   -162   -655   -580   -525   -569   -657   -505   -291   -416    -28 
  -280   -323   -342   -411   -513    358   -434   -448   -364   -511   -418   -351   -456   -453   -409   -207   -420   -415   -441   -493 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 1.2e-115 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.933333  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.566667  0.000000  0.000000  0.000000  0.000000  0.000000  0.433333  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.033333  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.933333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GKQVYLG MEME-3 regular expression
--------------------------------------------------------------------------------
G[KR]QVYLG
--------------------------------------------------------------------------------




Time 11.48 secs.

********************************************************************************


********************************************************************************
MOTIF AYDIAAI MEME-4	width =   7  sites =  30  llr = 548  E-value = 1.6e-114
********************************************************************************
--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 Description
--------------------------------------------------------------------------------
Simplified        A  a:::aa:
pos.-specific     C  :::::::
probability       D  ::a::::
matrix            E  :::::::
                  F  :::::::
                  G  :::::::
                  H  :::::::
                  I  :::4::8
                  K  :::2:::
                  L  :::1::1
                  M  :::1:::
                  N  :::::::
                  P  :::::::
                  Q  :::::::
                  R  :::2:::
                  S  :::::::
                  T  :::::::
                  V  ::::::1
                  W  :::::::
                  Y  :a:::::

         bits    6.6        
                 5.9        
                 5.2        
                 4.6  *     
Relative         3.9 *** ***
Entropy          3.3 *** ***
(26.4 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           AYDIAAI
consensus               K   
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 373  1.12e-09 TFATEEEAAE AYDIAAI KFRGINAVTN
AT5G57390.1                 345  1.12e-09 TFSTQEEAAE AYDIAAI KFRGLNAVTN
AT5G17430.1                 352  1.12e-09 TFGTQEEAAE AYDIAAI KFRGLSAVTN
AT5G10510.3                 430  1.12e-09 TFATEEEAAE AYDIAAI KFRGINAVTN
AT5G10510.2                 407  1.12e-09 TFATEEEAAE AYDIAAI KFRGINAVTN
AT5G10510.1                 395  1.12e-09 TFATEEEAAE AYDIAAI KFRGINAVTN
AT3G20840.1                 323  1.12e-09 TFSTEEEAAE AYDIAAI KFRGLNAVTN
AT1G79700.2                 194  1.12e-09 TYATQEEAAI AYDIAAI EYRGLNAVTN
AT1G79700.1                 184  1.12e-09 VFATQEEAAI AYDIAAI EYRGLNAVTN
AT1G72570.1                 365  1.12e-09 TFSTQEEAAE AYDIAAI KFRGLNAVTN
AT1G51190.1                 332  1.12e-09 TFSTEEEAAE AYDIAAI KFRGLNAVTN
AT1G16060.2                 130  1.12e-09 TYATQEEAAI AYDIAAI EYRGLNAVTN
AT1G16060.1                 200  1.12e-09 TYATQEEAAI AYDIAAI EYRGLNAVTN
AT5G67180.1                 227  2.68e-09 LFDTEIEAAR AYDKAAI KCNGKDAVTN
AT4G36920.2                 262  2.68e-09 LFDTEVEAAR AYDKAAI KCNGKDAVTN
AT4G36920.1                 262  2.68e-09 LFDTEVEAAR AYDKAAI KCNGKDAVTN
AT2G28550.3                 284  2.68e-09 LFDSEVEAAR AYDKAAI NTNGREAVTN
AT2G28550.2                 269  2.68e-09 ARMGQFLGKK AYDKAAI NTNGREAVTN
AT2G28550.1                 269  2.68e-09 ARMGQFLGKK AYDKAAI NTNGREAVTN
AT3G54320.3                 207  3.31e-09 TYNTQEEAAA AYDMAAI EYRGANAVTN
AT3G54320.1                 207  3.31e-09 TYNTQEEAAA AYDMAAI EYRGANAVTN
AT3G54990.2                 160  5.28e-09 GFDTAYAAAR AYDRAAI KFRGLDADIN
AT3G54990.1                 160  5.28e-09 GFDTAYAAAR AYDRAAI KFRGLDADIN
AT2G39250.1                 146  5.28e-09 GFDTAYTAAR AYDRAAI RFRGLQADIN
AT4G37750.1                 425  1.03e-08 TFGTQEEAAE AYDVAAI KFRGTNAVTN
AT5G60120.2                 198  2.08e-08 GFDTAHAAAR AYDRAAV KFRGLEADIN
AT5G60120.1                 198  2.08e-08 GFDTAHAAAR AYDRAAV KFRGLEADIN
AT2G41710.3                 153  3.64e-08 AYDDEEAAAR AYDLAAL KYWGPGTLIN
AT2G41710.2                 118  3.64e-08 AYDDEEAAAR AYDLAAL KYWGPGTLIN
AT2G41710.1                 118  3.64e-08 AYDDEEAAAR AYDLAAL KYWGPGTLIN
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       1.1e-09  372_[4]_119
AT5G57390.1                       1.1e-09  344_[4]_207
AT5G17430.1                       1.1e-09  351_[4]_226
AT5G10510.3                       1.1e-09  429_[4]_168
AT5G10510.2                       1.1e-09  406_[4]_168
AT5G10510.1                       1.1e-09  394_[4]_168
AT3G20840.1                       1.1e-09  322_[4]_245
AT1G79700.2                       1.1e-09  193_[4]_113
AT1G79700.1                       1.1e-09  183_[4]_113
AT1G72570.1                       1.1e-09  364_[4]_44
AT1G51190.1                       1.1e-09  331_[4]_230
AT1G16060.2                       1.1e-09  129_[4]_139
AT1G16060.1                       1.1e-09  199_[4]_139
AT5G67180.1                       2.7e-09  226_[4]_119
AT4G36920.2                       2.7e-09  261_[4]_164
AT4G36920.1                       2.7e-09  261_[4]_164
AT2G28550.3                       2.7e-09  283_[4]_174
AT2G28550.2                       2.7e-09  268_[4]_106
AT2G28550.1                       2.7e-09  268_[4]_174
AT3G54320.3                       3.3e-09  206_[4]_217
AT3G54320.1                       3.3e-09  206_[4]_225
AT3G54990.2                       5.3e-09  159_[4]_81
AT3G54990.1                       5.3e-09  159_[4]_180
AT2G39250.1                       5.3e-09  145_[4]_173
AT4G37750.1                         1e-08  424_[4]_124
AT5G60120.2                       2.1e-08  197_[4]_303
AT5G60120.1                       2.1e-08  197_[4]_281
AT2G41710.3                       3.6e-08  152_[4]_299
AT2G41710.2                       3.6e-08  117_[4]_304
AT2G41710.1                       3.6e-08  117_[4]_299
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF AYDIAAI width=7 seqs=30
AT5G65510.1              (  373) AYDIAAI  1 
AT5G57390.1              (  345) AYDIAAI  1 
AT5G17430.1              (  352) AYDIAAI  1 
AT5G10510.3              (  430) AYDIAAI  1 
AT5G10510.2              (  407) AYDIAAI  1 
AT5G10510.1              (  395) AYDIAAI  1 
AT3G20840.1              (  323) AYDIAAI  1 
AT1G79700.2              (  194) AYDIAAI  1 
AT1G79700.1              (  184) AYDIAAI  1 
AT1G72570.1              (  365) AYDIAAI  1 
AT1G51190.1              (  332) AYDIAAI  1 
AT1G16060.2              (  130) AYDIAAI  1 
AT1G16060.1              (  200) AYDIAAI  1 
AT5G67180.1              (  227) AYDKAAI  1 
AT4G36920.2              (  262) AYDKAAI  1 
AT4G36920.1              (  262) AYDKAAI  1 
AT2G28550.3              (  284) AYDKAAI  1 
AT2G28550.2              (  269) AYDKAAI  1 
AT2G28550.1              (  269) AYDKAAI  1 
AT3G54320.3              (  207) AYDMAAI  1 
AT3G54320.1              (  207) AYDMAAI  1 
AT3G54990.2              (  160) AYDRAAI  1 
AT3G54990.1              (  160) AYDRAAI  1 
AT2G39250.1              (  146) AYDRAAI  1 
AT4G37750.1              (  425) AYDVAAI  1 
AT5G60120.2              (  198) AYDRAAV  1 
AT5G60120.1              (  198) AYDRAAV  1 
AT2G41710.3              (  153) AYDLAAL  1 
AT2G41710.2              (  118) AYDLAAL  1 
AT2G41710.1              (  118) AYDLAAL  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 1.6e-114 
   369   -466   -753   -808   -751   -590   -743   -724   -772   -729   -709   -763   -662   -751   -763   -598   -592   -619   -713   -778 
  -812   -612   -776   -854   -441   -731   -607   -723   -785   -679   -713   -792   -730   -766   -773   -847   -781   -738   -505    470 
  -644   -554    418   -441   -691   -641   -599   -651   -655   -677   -663   -466   -674   -659   -687   -695   -666   -648   -649   -679 
  -324   -238   -541   -445   -295   -489   -398    351    195     71    172   -460   -475   -356    134   -447   -306      1   -376   -369 
   369   -466   -753   -808   -751   -590   -743   -724   -772   -729   -709   -763   -662   -751   -763   -598   -592   -619   -713   -778 
   369   -466   -753   -808   -751   -590   -743   -724   -772   -729   -709   -763   -662   -751   -763   -598   -592   -619   -713   -778 
  -384   -284   -504   -501   -325   -559   -539    445   -432     53   -124   -503   -528   -490   -515   -511   -345    119   -449   -416 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 1.6e-114 
 1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.433333  0.200000  0.100000  0.066667  0.000000  0.000000  0.000000  0.166667  0.000000  0.000000  0.033333  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.833333  0.000000  0.100000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.066667  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AYDIAAI MEME-4 regular expression
--------------------------------------------------------------------------------
AYD[IK]AAI
--------------------------------------------------------------------------------




Time 15.16 secs.

********************************************************************************


********************************************************************************
MOTIF RRKSSGF MEME-5	width =   7  sites =  30  llr = 493  E-value = 1.6e-087
********************************************************************************
--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 Description
--------------------------------------------------------------------------------
Simplified        A  ::::1::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  ::1::::
                  F  ::::::a
                  G  :::::9:
                  H  :::::::
                  I  :::::::
                  K  ::5::::
                  L  :::::::
                  M  :::::::
                  N  :::::::
                  P  :::::::
                  Q  ::3::::
                  R  9a:::::
                  S  :::a71:
                  T  ::::2::
                  V  :::::::
                  W  :::::::
                  Y  :::::::

         bits    6.6        
                 5.9        
                 5.2        
                 4.6       *
Relative         3.9 **    *
Entropy          3.3 ** * **
(23.7 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           RRKSSGF
consensus              Q T  
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 321  6.57e-09 MTKQEFIASL RRKSSGF SRGASIYRGV
AT5G57390.1                 293  6.57e-09 MTRQEFVASL RRKSSGF SRGASMYRGV
AT5G17430.1                 300  6.57e-09 MTRQEYVASL RRKSSGF SRGASIYRGV
AT5G10510.3                 378  6.57e-09 MTKQEFIASL RRKSSGF SRGASIYRGV
AT5G10510.2                 355  6.57e-09 MTKQEFIASL RRKSSGF SRGASIYRGV
AT5G10510.1                 343  6.57e-09 MTKQEFIASL RRKSSGF SRGASIYRGV
AT4G37750.1                 373  6.57e-09 MTRQEYVAHL RRKSSGF SRGASIYRGV
AT3G20840.1                 271  6.57e-09 MTRQEFVAAI RRKSSGF SRGASMYRGV
AT2G41710.3                 195  6.57e-09 LSREEYLASL RRKSSGF SRGIAKYRGL
AT2G41710.1                 160  6.57e-09 LSREEYLASL RRKSSGF SRGIAKYRGL
AT1G79700.2                 142  6.57e-09 QSKEEYIGSL RRKSSGF SRGVSKYRGV
AT1G79700.1                 142  6.57e-09 QSKEEYIGSL RRKSSGF SRGVSKYRGV
AT1G51190.1                 280  6.57e-09 MTRQEFVASI RRKSSGF SRGASMYRGV
AT1G16060.2                  78  6.57e-09 QSKEEYIGSL RRKSSGF SRGVSKYRGV
AT1G16060.1                 148  6.57e-09 QSKEEYIGSL RRKSSGF SRGVSKYRGV
AT5G60120.2                 240  1.29e-08 LSKEEVVQVL RRQSSGF SRNNSRYQGV
AT5G60120.1                 240  1.29e-08 LSKEEVVQVL RRQSSGF SRNNSRYQGV
AT3G54320.3                 155  1.29e-08 VTKEEYLASL RRQSSGF SRGVSKYRGV
AT3G54320.1                 155  1.29e-08 VTKEEYLASL RRQSSGF SRGVSKYRGV
AT5G67180.1                 176  1.95e-08 LTKEEFMHVL RRQSTGF PRGSSKYRGV
AT4G36920.2                 211  1.95e-08 LTKEEFVHVL RRQSTGF PRGSSKYRGV
AT4G36920.1                 211  1.95e-08 LTKEEFVHVL RRQSTGF PRGSSKYRGV
AT2G28550.3                 233  1.95e-08 LSKEEFVHIL RRQSTGF SRGSSKYRGV
AT2G28550.2                 233  1.95e-08 LSKEEFVHIL RRQSTGF SRGSSKYRGV
AT2G28550.1                 233  1.95e-08 LSKEEFVHIL RRQSTGF SRGSSKYRGV
AT1G72570.1                 313  5.08e-08 MNRQEFVAML RRNSSGF SRGASVYRGV
AT2G41710.2                 165  2.07e-07 YLASLRRYPF GRKSSGF SRGIAKYRGL
AT3G54990.2                 202  2.43e-06 LNKVEFVQTL RRESASF GRGSSKYKGL
AT3G54990.1                 202  2.43e-06 LNKVEFVQTL RRESASF GRGSSKYKGL
AT2G39250.1                 301  2.29e-05 PITEIKPLKT VVASSGF PFITMINPSS
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       6.6e-09  320_[5]_171
AT5G57390.1                       6.6e-09  292_[5]_259
AT5G17430.1                       6.6e-09  299_[5]_278
AT5G10510.3                       6.6e-09  377_[5]_220
AT5G10510.2                       6.6e-09  354_[5]_220
AT5G10510.1                       6.6e-09  342_[5]_220
AT4G37750.1                       6.6e-09  372_[5]_176
AT3G20840.1                       6.6e-09  270_[5]_297
AT2G41710.3                       6.6e-09  194_[5]_257
AT2G41710.1                       6.6e-09  159_[5]_257
AT1G79700.2                       6.6e-09  141_[5]_165
AT1G79700.1                       6.6e-09  141_[5]_155
AT1G51190.1                       6.6e-09  279_[5]_282
AT1G16060.2                       6.6e-09  77_[5]_191
AT1G16060.1                       6.6e-09  147_[5]_191
AT5G60120.2                       1.3e-08  239_[5]_261
AT5G60120.1                       1.3e-08  239_[5]_239
AT3G54320.3                       1.3e-08  154_[5]_269
AT3G54320.1                       1.3e-08  154_[5]_277
AT5G67180.1                         2e-08  175_[5]_170
AT4G36920.2                         2e-08  210_[5]_215
AT4G36920.1                         2e-08  210_[5]_215
AT2G28550.3                         2e-08  232_[5]_225
AT2G28550.2                         2e-08  232_[5]_142
AT2G28550.1                         2e-08  232_[5]_210
AT1G72570.1                       5.1e-08  312_[5]_96
AT2G41710.2                       2.1e-07  164_[5]_257
AT3G54990.2                       2.4e-06  201_[5]_39
AT3G54990.1                       2.4e-06  201_[5]_138
AT2G39250.1                       2.3e-05  300_[5]_18
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF RRKSSGF width=7 seqs=30
AT5G65510.1              (  321) RRKSSGF  1 
AT5G57390.1              (  293) RRKSSGF  1 
AT5G17430.1              (  300) RRKSSGF  1 
AT5G10510.3              (  378) RRKSSGF  1 
AT5G10510.2              (  355) RRKSSGF  1 
AT5G10510.1              (  343) RRKSSGF  1 
AT4G37750.1              (  373) RRKSSGF  1 
AT3G20840.1              (  271) RRKSSGF  1 
AT2G41710.3              (  195) RRKSSGF  1 
AT2G41710.1              (  160) RRKSSGF  1 
AT1G79700.2              (  142) RRKSSGF  1 
AT1G79700.1              (  142) RRKSSGF  1 
AT1G51190.1              (  280) RRKSSGF  1 
AT1G16060.2              (   78) RRKSSGF  1 
AT1G16060.1              (  148) RRKSSGF  1 
AT5G60120.2              (  240) RRQSSGF  1 
AT5G60120.1              (  240) RRQSSGF  1 
AT3G54320.3              (  155) RRQSSGF  1 
AT3G54320.1              (  155) RRQSSGF  1 
AT5G67180.1              (  176) RRQSTGF  1 
AT4G36920.2              (  211) RRQSTGF  1 
AT4G36920.1              (  211) RRQSTGF  1 
AT2G28550.3              (  233) RRQSTGF  1 
AT2G28550.2              (  233) RRQSTGF  1 
AT2G28550.1              (  233) RRQSTGF  1 
AT1G72570.1              (  313) RRNSSGF  1 
AT2G41710.2              (  165) GRKSSGF  1 
AT3G54990.2              (  202) RRESASF  1 
AT3G54990.1              (  202) RRESASF  1 
AT2G39250.1              (  301) VVASSGF  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 1.6e-087 
  -375   -220   -464   -469   -479   -262   -258   -354   -124   -374   -362   -389   -374   -272    389   -450   -392   -201   -318   -449 
  -394   -239   -481   -486   -495   -464   -276   -370   -142   -390   -379   -407   -391   -290    391   -469   -410   -169   -335   -465 
  -115   -453   -339     22   -594   -483   -348   -445    339   -438   -390    -86   -485    274   -190   -451   -384   -427   -517   -496 
  -625   -570   -768   -857   -792   -672   -764   -820   -807   -789   -812   -809   -709   -806   -800    317   -685   -751   -733   -801 
   -51   -159   -400   -449   -407   -378   -418   -355   -337   -394   -317   -286   -373   -401   -378    270    160   -366   -426   -420 
  -283   -325   -350   -419   -519    355   -441   -455   -372   -517   -424   -358   -461   -460   -417   -125   -422   -419   -449   -500 
  -676   -487   -713   -753    464   -694   -646   -524   -714   -472   -525   -753   -664   -735   -737   -728   -703   -568   -492   -395 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 1.6e-087 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.933333  0.000000  0.000000  0.033333  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.966667  0.000000  0.000000  0.033333  0.000000  0.000000 
 0.033333  0.000000  0.000000  0.066667  0.000000  0.000000  0.000000  0.000000  0.533333  0.000000  0.000000  0.033333  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000 
 0.066667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.733333  0.200000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.933333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.066667  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif RRKSSGF MEME-5 regular expression
--------------------------------------------------------------------------------
RR[KQ]S[ST]GF
--------------------------------------------------------------------------------




Time 18.76 secs.

********************************************************************************


********************************************************************************
MOTIF AAJKYWG MEME-6	width =   7  sites =  28  llr = 475  E-value = 8.1e-084
********************************************************************************
--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 Description
--------------------------------------------------------------------------------
Simplified        A  99:::::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  :::::::
                  F  ::::2::
                  G  1:::::9
                  H  :::::::
                  I  ::4::::
                  K  :::9:1:
                  L  ::6::::
                  M  :::::::
                  N  ::::::1
                  P  :::::::
                  Q  :::1:::
                  R  :::::2:
                  S  :::::::
                  T  :::::::
                  V  ::1::::
                  W  ::::27:
                  Y  :1::6::

         bits    6.6        
                 5.9        
                 5.2        
                 4.6        
Relative         3.9    *** 
Entropy          3.3 *******
(24.5 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           AALKYWG
consensus              I FR 
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 283  1.26e-09 EDRAARAYDL AALKYWG STATTNFPVS
AT5G57390.1                 255  1.26e-09 EDKAARAYDL AALKYWG PTTTTNFPIS
AT5G17430.1                 262  1.26e-09 EEKAARAYDL AALKYWG TTTTTNFPLS
AT4G37750.1                 335  1.26e-09 EEKAARAYDL AALKYWG PSTHTNFSAE
AT3G54320.3                 117  1.26e-09 EEAAAHTYDL AALKYWG PDTILNFPAE
AT3G54320.1                 117  1.26e-09 EEAAAHTYDL AALKYWG PDTILNFPAE
AT3G20840.1                 233  1.26e-09 EDKAARSYDL AALKYWG PSTTTNFPIT
AT1G79700.2                 104  1.26e-09 EEAAARAYDL AALKYWG RDTLLNFPLP
AT1G79700.1                 104  1.26e-09 EEAAARAYDL AALKYWG RDTLLNFPLP
AT1G72570.1                 275  1.26e-09 EEKAARAYDL AALKYWG PTTHLNFPLS
AT1G51190.1                 242  1.26e-09 EEKAARAYDL AALKYWG PSTTTNFPIT
AT1G16060.2                  40  1.26e-09 EDAAARAYDL AALKYWG RDTILNFPLC
AT1G16060.1                 110  1.26e-09 EDAAARAYDL AALKYWG RDTILNFPLC
AT5G10510.3                 340  9.58e-09 EDKAARAYDL AALKYWN ATATTNFPIT
AT5G10510.2                 317  9.58e-09 EDKAARAYDL AALKYWN ATATTNFPIT
AT5G10510.1                 305  9.58e-09 EDKAARAYDL AALKYWN ATATTNFPIT
AT5G67180.1                 138  2.59e-08 AHAAARAYDR AAIKFRG VDADINFDIE
AT4G36920.2                 173  2.59e-08 AHAAARAYDR AAIKFRG VEADINFNID
AT4G36920.1                 173  2.59e-08 AHAAARAYDR AAIKFRG VEADINFNID
AT2G28550.3                 195  2.59e-08 AHAAARAYDR AAIKFRG VDADINFTLG
AT2G28550.2                 195  2.59e-08 AHAAARAYDR AAIKFRG VDADINFTLG
AT2G28550.1                 195  2.59e-08 AHAAARAYDR AAIKFRG VDADINFTLG
AT2G41710.3                 259  2.77e-08 FCLERKIDLT GYIKWWG ANKNRQPESS
AT2G41710.2                 229  2.77e-08 FCLERKIDLT GYIKWWG ANKNRQPESS
AT2G41710.1                 224  2.77e-08 FCLERKIDLT GYIKWWG ANKNRQPESS
AT3G54990.1                 243  7.87e-07 HLFQNRGWDA AAIKYNE LGKGEGAMKF
AT5G60120.2                 280  9.53e-07 QLHGNMGCDK AAVQWKG REAASLIEPH
AT5G60120.1                 280  9.53e-07 QLHGNMGCDK AAVQWKG REAASLIEPH
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       1.3e-09  282_[6]_209
AT5G57390.1                       1.3e-09  254_[6]_297
AT5G17430.1                       1.3e-09  261_[6]_316
AT4G37750.1                       1.3e-09  334_[6]_214
AT3G54320.3                       1.3e-09  116_[6]_307
AT3G54320.1                       1.3e-09  116_[6]_315
AT3G20840.1                       1.3e-09  232_[6]_335
AT1G79700.2                       1.3e-09  103_[6]_203
AT1G79700.1                       1.3e-09  103_[6]_193
AT1G72570.1                       1.3e-09  274_[6]_134
AT1G51190.1                       1.3e-09  241_[6]_320
AT1G16060.2                       1.3e-09  39_[6]_229
AT1G16060.1                       1.3e-09  109_[6]_229
AT5G10510.3                       9.6e-09  339_[6]_258
AT5G10510.2                       9.6e-09  316_[6]_258
AT5G10510.1                       9.6e-09  304_[6]_258
AT5G67180.1                       2.6e-08  137_[6]_208
AT4G36920.2                       2.6e-08  172_[6]_253
AT4G36920.1                       2.6e-08  172_[6]_253
AT2G28550.3                       2.6e-08  194_[6]_263
AT2G28550.2                       2.6e-08  194_[6]_180
AT2G28550.1                       2.6e-08  194_[6]_248
AT2G41710.3                       2.8e-08  258_[6]_193
AT2G41710.2                       2.8e-08  228_[6]_193
AT2G41710.1                       2.8e-08  223_[6]_193
AT3G54990.1                       7.9e-07  242_[6]_97
AT5G60120.2                       9.5e-07  279_[6]_221
AT5G60120.1                       9.5e-07  279_[6]_199
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF AAJKYWG width=7 seqs=28
AT5G65510.1              (  283) AALKYWG  1 
AT5G57390.1              (  255) AALKYWG  1 
AT5G17430.1              (  262) AALKYWG  1 
AT4G37750.1              (  335) AALKYWG  1 
AT3G54320.3              (  117) AALKYWG  1 
AT3G54320.1              (  117) AALKYWG  1 
AT3G20840.1              (  233) AALKYWG  1 
AT1G79700.2              (  104) AALKYWG  1 
AT1G79700.1              (  104) AALKYWG  1 
AT1G72570.1              (  275) AALKYWG  1 
AT1G51190.1              (  242) AALKYWG  1 
AT1G16060.2              (   40) AALKYWG  1 
AT1G16060.1              (  110) AALKYWG  1 
AT5G10510.3              (  340) AALKYWN  1 
AT5G10510.2              (  317) AALKYWN  1 
AT5G10510.1              (  305) AALKYWN  1 
AT5G67180.1              (  138) AAIKFRG  1 
AT4G36920.2              (  173) AAIKFRG  1 
AT4G36920.1              (  173) AAIKFRG  1 
AT2G28550.3              (  195) AAIKFRG  1 
AT2G28550.2              (  195) AAIKFRG  1 
AT2G28550.1              (  195) AAIKFRG  1 
AT2G41710.3              (  259) GYIKWWG  1 
AT2G41710.2              (  229) GYIKWWG  1 
AT2G41710.1              (  224) GYIKWWG  1 
AT3G54990.1              (  243) AAIKYNE  1 
AT5G60120.2              (  280) AAVQWKG  1 
AT5G60120.1              (  280) AAVQWKG  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.79299 E= 8.1e-084 
   350   -258   -635   -634   -600     45   -629   -526   -615   -557   -493   -589   -520   -585   -620   -374   -383   -391   -608   -656 
   351   -351   -683   -702   -443   -494   -584   -570   -666   -582   -552   -650   -592   -641   -669   -476   -479   -475   -502    147 
  -504   -363   -787   -744   -355   -765   -736    333   -703    308   -216   -762   -696   -675   -744   -763   -488     89   -553   -569 
  -413   -343   -515   -443   -573   -518   -413   -384    423   -457   -395   -430   -485    -29   -121   -524   -415   -446   -458   -517 
  -654   -449   -693   -699    245   -695   -347   -472   -614   -437   -453   -588   -658   -562   -604   -663   -606   -500    366    396 
  -442   -443   -510   -377   -580   -515   -340   -443     97   -429   -385    -81   -518   -244    182   -487   -401   -433    550   -474 
  -266   -311   -310   -152   -494    348   -406   -429   -339   -493   -399     -9   -437   -427   -387   -364   -401   -399   -422   -471 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 28 E= 8.1e-084 
 0.892857  0.000000  0.000000  0.000000  0.000000  0.107143  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.892857  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.107143 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.357143  0.000000  0.571429  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.071429  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.928571  0.000000  0.000000  0.000000  0.000000  0.071429  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.214286  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.178571  0.607143 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.071429  0.000000  0.000000  0.035714  0.000000  0.000000  0.214286  0.000000  0.000000  0.000000  0.678571  0.000000 
 0.000000  0.000000  0.000000  0.035714  0.000000  0.857143  0.000000  0.000000  0.000000  0.000000  0.000000  0.107143  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif AAJKYWG MEME-6 regular expression
--------------------------------------------------------------------------------
AA[LI]K[YF][WR]G
--------------------------------------------------------------------------------




Time 22.30 secs.

********************************************************************************


********************************************************************************
MOTIF GRWZARI MEME-7	width =   7  sites =  26  llr = 457  E-value = 4.3e-082
********************************************************************************
--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 Description
--------------------------------------------------------------------------------
Simplified        A  ::::a:1
pos.-specific     C  :::::::
probability       D  :::1:::
matrix            E  :::4:::
                  F  :::::::
                  G  91:1:::
                  H  :::::::
                  I  ::::::6
                  K  :::::::
                  L  :::::::
                  M  ::::::3
                  N  :::::::
                  P  :::::::
                  Q  :::4:1:
                  R  :9:::8:
                  S  1::::1:
                  T  :::::::
                  V  :::::::
                  W  ::a::::
                  Y  :::::::

         bits    6.6        
                 5.9   *    
                 5.2   *    
                 4.6   *    
Relative         3.9  **    
Entropy          3.3 *** ***
(25.3 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           GRWEARI
consensus               Q  M
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 344  4.76e-10 YRGVTRHHQQ GRWQARI GRVAGNKDLY
AT5G57390.1                 316  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT5G17430.1                 323  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT5G10510.3                 401  4.76e-10 YRGVTRHHQQ GRWQARI GRVAGNKDLY
AT5G10510.2                 378  4.76e-10 YRGVTRHHQQ GRWQARI GRVAGNKDLY
AT5G10510.1                 366  4.76e-10 YRGVTRHHQQ GRWQARI GRVAGNKDLY
AT4G37750.1                 396  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT3G20840.1                 294  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT1G72570.1                 336  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT1G51190.1                 303  4.76e-10 YRGVTRHHQH GRWQARI GRVAGNKDLY
AT3G54320.3                 178  1.12e-09 YRGVARHHHN GRWEARI GRVFGNKYLY
AT3G54320.1                 178  1.12e-09 YRGVARHHHN GRWEARI GRVFGNKYLY
AT1G79700.2                 165  1.12e-09 YRGVARHHHN GRWEARI GRVFGNKYLY
AT1G79700.1                 165  1.12e-09 YRGVARHHHN GRWEARI GRVFATQEEA
AT1G16060.1                 171  1.12e-09 YRGVAKHHHN GRWEARI GRVFGNKYLY
AT4G36920.2                 233  1.75e-09 KYRGVTLHKC GRWEARM GQFLGKKYVY
AT4G36920.1                 233  1.75e-09 KYRGVTLHKC GRWEARM GQFLGKKYVY
AT2G28550.3                 255  1.75e-09 KYRGVTLHKC GRWEARM GQFLGKKYIY
AT2G28550.2                 255  1.75e-09 KYRGVTLHKC GRWEARM GQFLGKKAYD
AT2G28550.1                 255  1.75e-09 KYRGVTLHKC GRWEARM GQFLGKKAYD
AT5G67180.1                 198  1.81e-07 KYRGVTLHKC GRWESRL GQFLNKKYVY
AT5G60120.2                 262  7.57e-07 RYQGVALQKI GGWGAQM EQLHGNMGCD
AT5G60120.1                 262  7.57e-07 RYQGVALQKI GGWGAQM EQLHGNMGCD
AT2G41710.3                 213  2.11e-06 RGIAKYRGLQ SRWDASA SRMPGPEYFS
AT2G41710.2                 183  2.11e-06 RGIAKYRGLQ SRWDASA SRMPGPEYFS
AT2G41710.1                 178  2.11e-06 RGIAKYRGLQ SRWDASA SRMPGPEYFS
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       4.8e-10  343_[7]_148
AT5G57390.1                       4.8e-10  315_[7]_236
AT5G17430.1                       4.8e-10  322_[7]_255
AT5G10510.3                       4.8e-10  400_[7]_197
AT5G10510.2                       4.8e-10  377_[7]_197
AT5G10510.1                       4.8e-10  365_[7]_197
AT4G37750.1                       4.8e-10  395_[7]_153
AT3G20840.1                       4.8e-10  293_[7]_274
AT1G72570.1                       4.8e-10  335_[7]_73
AT1G51190.1                       4.8e-10  302_[7]_259
AT3G54320.3                       1.1e-09  177_[7]_246
AT3G54320.1                       1.1e-09  177_[7]_254
AT1G79700.2                       1.1e-09  164_[7]_142
AT1G79700.1                       1.1e-09  164_[7]_132
AT1G16060.1                       1.1e-09  170_[7]_168
AT4G36920.2                       1.8e-09  232_[7]_193
AT4G36920.1                       1.8e-09  232_[7]_193
AT2G28550.3                       1.8e-09  254_[7]_203
AT2G28550.2                       1.8e-09  254_[7]_120
AT2G28550.1                       1.8e-09  254_[7]_188
AT5G67180.1                       1.8e-07  197_[7]_148
AT5G60120.2                       7.6e-07  261_[7]_239
AT5G60120.1                       7.6e-07  261_[7]_217
AT2G41710.3                       2.1e-06  212_[7]_239
AT2G41710.2                       2.1e-06  182_[7]_239
AT2G41710.1                       2.1e-06  177_[7]_239
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF GRWZARI width=7 seqs=26
AT5G65510.1              (  344) GRWQARI  1 
AT5G57390.1              (  316) GRWQARI  1 
AT5G17430.1              (  323) GRWQARI  1 
AT5G10510.3              (  401) GRWQARI  1 
AT5G10510.2              (  378) GRWQARI  1 
AT5G10510.1              (  366) GRWQARI  1 
AT4G37750.1              (  396) GRWQARI  1 
AT3G20840.1              (  294) GRWQARI  1 
AT1G72570.1              (  336) GRWQARI  1 
AT1G51190.1              (  303) GRWQARI  1 
AT3G54320.3              (  178) GRWEARI  1 
AT3G54320.1              (  178) GRWEARI  1 
AT1G79700.2              (  165) GRWEARI  1 
AT1G79700.1              (  165) GRWEARI  1 
AT1G16060.1              (  171) GRWEARI  1 
AT4G36920.2              (  233) GRWEARM  1 
AT4G36920.1              (  233) GRWEARM  1 
AT2G28550.3              (  255) GRWEARM  1 
AT2G28550.2              (  255) GRWEARM  1 
AT2G28550.1              (  255) GRWEARM  1 
AT5G67180.1              (  198) GRWESRL  1 
AT5G60120.2              (  262) GGWGAQM  1 
AT5G60120.1              (  262) GGWGAQM  1 
AT2G41710.3              (  213) SRWDASA  1 
AT2G41710.2              (  183) SRWDASA  1 
AT2G41710.1              (  178) SRWDASA  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 9.51186 E= 4.3e-082 
  -276   -315   -355   -423   -520    350   -444   -457   -377   -517   -426   -362   -459   -461   -421    -52   -413   -415   -452   -503 
  -457   -307   -539   -551   -559    -62   -348   -445   -215   -461   -451   -475   -456   -362    390   -533   -475   -520   -405   -531 
  -560   -399   -558   -574   -292   -567   -536   -488   -524   -373   -419   -582   -570   -530   -531   -626   -547   -466    615   -339 
  -346   -644    113    277   -684    -14   -441   -486   -273   -497   -444   -398   -434    290   -454   -460   -405   -427   -684   -600 
   358   -194   -573   -556   -525   -348   -569   -441   -535   -475   -411   -535   -484   -525   -553   -125   -332   -308   -542   -588 
  -380   -258   -464   -428   -507   -455   -279   -377   -105   -389   -368   -387   -403     -7    377    -89   -388   -432   -355   -460 
    51   -346   -750   -693   -310   -699   -648    398   -642    -13    369   -705   -646   -608   -670   -681   -461   -153   -488   -509 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 26 E= 4.3e-082 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.884615  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.115385  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.076923  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.923077  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000 
 0.000000  0.000000  0.115385  0.423077  0.000000  0.076923  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.384615  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.961538  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.038462  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.076923  0.807692  0.115385  0.000000  0.000000  0.000000  0.000000 
 0.115385  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.576923  0.000000  0.038462  0.269231  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif GRWZARI MEME-7 regular expression
--------------------------------------------------------------------------------
GRW[EQ]AR[IM]
--------------------------------------------------------------------------------




Time 25.78 secs.

********************************************************************************


********************************************************************************
MOTIF NFDISDY MEME-8	width =   7  sites =  30  llr = 466  E-value = 2.5e-075
********************************************************************************
--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 Description
--------------------------------------------------------------------------------
Simplified        A  :::::::
pos.-specific     C  :::::::
probability       D  ::3:24:
matrix            E  ::2::::
                  F  :a:::::
                  G  ::::1::
                  H  :::::::
                  I  :::6:::
                  K  :::::::
                  L  :::::::
                  M  :::2:::
                  N  a:1:22:
                  P  ::2::::
                  Q  :::::::
                  R  :::::3:
                  S  ::::31:
                  T  ::::2::
                  V  ::13:::
                  W  :::::::
                  Y  ::::::a

         bits    6.6        
                 5.9        
                 5.2        
                 4.6  *    *
Relative         3.9 **    *
Entropy          3.3 ** *  *
(22.4 bits)      2.6 ** *  *
                 2.0 **** **
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           NFDISDY
consensus              PVTR 
sequence               E  N 
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT4G37750.1                 441  3.24e-09 IKFRGTNAVT NFDITRY DVDRIMSSNT
AT1G16060.2                 146  8.18e-09 IEYRGLNAVT NFDISRY LKLPVPENPI
AT1G16060.1                 216  8.18e-09 IEYRGLNAVT NFDISRY LKLPVPENPI
AT1G72570.1                 381  9.40e-09 IKFRGLNAVT NFDINRY DVKRICSSST
AT5G10510.3                 352  2.20e-08 LKYWNATATT NFPITNY SKEVEEMKHM
AT5G10510.2                 329  2.20e-08 LKYWNATATT NFPITNY SKEVEEMKHM
AT5G10510.1                 317  2.20e-08 LKYWNATATT NFPITNY SKEVEEMKHM
AT3G54320.3                 223  2.20e-08 IEYRGANAVT NFDISNY IDRLKKKGVF
AT3G54320.1                 223  2.20e-08 IEYRGANAVT NFDISNY IDRLKKKGVF
AT3G20840.1                 339  2.89e-08 IKFRGLNAVT NFEINRY DVKAILESST
AT1G51190.1                 348  2.89e-08 IKFRGLNAVT NFEINRY DVKAILESNT
AT5G57390.1                 267  3.59e-08 LKYWGPTTTT NFPISNY ESELEEMKHM
AT2G41710.3                 169  3.59e-08 LKYWGPGTLI NFPVTDY TRDLEEMQNL
AT2G41710.2                 134  3.59e-08 LKYWGPGTLI NFPVTDY TRDLEEMQNL
AT2G41710.1                 134  3.59e-08 LKYWGPGTLI NFPVTDY TRDLEEMQNL
AT5G17430.1                 368  3.90e-08 IKFRGLSAVT NFDMNRY NVKAILESPS
AT1G79700.2                 210  5.16e-08 IEYRGLNAVT NFDVSRY LNPNAAADKA
AT1G79700.1                 200  5.16e-08 IEYRGLNAVT NFDVSRY LNPNAAADKA
AT5G67180.1                 150  6.98e-08 IKFRGVDADI NFDIEDY LDDLKQMGNL
AT5G65510.1                 389  7.60e-08 IKFRGINAVT NFEMNRY DIEAVMNSSL
AT4G36920.2                 185  7.60e-08 IKFRGVEADI NFNIDDY DDDLKQMTNL
AT4G36920.1                 185  7.60e-08 IKFRGVEADI NFNIDDY DDDLKQMTNL
AT3G54990.2                 176  8.46e-08 IKFRGLDADI NFVVDDY RHDIDKMKNL
AT3G54990.1                 176  8.46e-08 IKFRGLDADI NFVVDDY RHDIDKMKNL
AT5G60120.2                 214  1.11e-07 VKFRGLEADI NFVIGDY EEDLKQMANL
AT5G60120.1                 214  1.11e-07 VKFRGLEADI NFVIGDY EEDLKQMANL
AT2G39250.1                 162  1.86e-07 IRFRGLQADI NFIVDDY KQDIEKMKNL
AT2G28550.3                 300  2.26e-07 INTNGREAVT NFEMSSY QNEINSESNN
AT2G28550.2                 285  2.26e-07 INTNGREAVT NFEMSSY QNEINSESNN
AT2G28550.1                 285  2.26e-07 INTNGREAVT NFEMSSY QNEINSESNN
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT4G37750.1                       3.2e-09  440_[8]_108
AT1G16060.2                       8.2e-09  145_[8]_123
AT1G16060.1                       8.2e-09  215_[8]_123
AT1G72570.1                       9.4e-09  380_[8]_28
AT5G10510.3                       2.2e-08  351_[8]_246
AT5G10510.2                       2.2e-08  328_[8]_246
AT5G10510.1                       2.2e-08  316_[8]_246
AT3G54320.3                       2.2e-08  222_[8]_201
AT3G54320.1                       2.2e-08  222_[8]_209
AT3G20840.1                       2.9e-08  338_[8]_229
AT1G51190.1                       2.9e-08  347_[8]_214
AT5G57390.1                       3.6e-08  266_[8]_285
AT2G41710.3                       3.6e-08  168_[8]_283
AT2G41710.2                       3.6e-08  133_[8]_288
AT2G41710.1                       3.6e-08  133_[8]_283
AT5G17430.1                       3.9e-08  367_[8]_210
AT1G79700.2                       5.2e-08  209_[8]_97
AT1G79700.1                       5.2e-08  199_[8]_97
AT5G67180.1                         7e-08  149_[8]_196
AT5G65510.1                       7.6e-08  388_[8]_103
AT4G36920.2                       7.6e-08  184_[8]_241
AT4G36920.1                       7.6e-08  184_[8]_241
AT3G54990.2                       8.5e-08  175_[8]_65
AT3G54990.1                       8.5e-08  175_[8]_164
AT5G60120.2                       1.1e-07  213_[8]_287
AT5G60120.1                       1.1e-07  213_[8]_265
AT2G39250.1                       1.9e-07  161_[8]_157
AT2G28550.3                       2.3e-07  299_[8]_158
AT2G28550.2                       2.3e-07  284_[8]_90
AT2G28550.1                       2.3e-07  284_[8]_158
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF NFDISDY width=7 seqs=30
AT4G37750.1              (  441) NFDITRY  1 
AT1G16060.2              (  146) NFDISRY  1 
AT1G16060.1              (  216) NFDISRY  1 
AT1G72570.1              (  381) NFDINRY  1 
AT5G10510.3              (  352) NFPITNY  1 
AT5G10510.2              (  329) NFPITNY  1 
AT5G10510.1              (  317) NFPITNY  1 
AT3G54320.3              (  223) NFDISNY  1 
AT3G54320.1              (  223) NFDISNY  1 
AT3G20840.1              (  339) NFEINRY  1 
AT1G51190.1              (  348) NFEINRY  1 
AT5G57390.1              (  267) NFPISNY  1 
AT2G41710.3              (  169) NFPVTDY  1 
AT2G41710.2              (  134) NFPVTDY  1 
AT2G41710.1              (  134) NFPVTDY  1 
AT5G17430.1              (  368) NFDMNRY  1 
AT1G79700.2              (  210) NFDVSRY  1 
AT1G79700.1              (  200) NFDVSRY  1 
AT5G67180.1              (  150) NFDIEDY  1 
AT5G65510.1              (  389) NFEMNRY  1 
AT4G36920.2              (  185) NFNIDDY  1 
AT4G36920.1              (  185) NFNIDDY  1 
AT3G54990.2              (  176) NFVVDDY  1 
AT3G54990.1              (  176) NFVVDDY  1 
AT5G60120.2              (  214) NFVIGDY  1 
AT5G60120.1              (  214) NFVIGDY  1 
AT2G39250.1              (  162) NFIVDDY  1 
AT2G28550.3              (  300) NFEMSSY  1 
AT2G28550.2              (  285) NFEMSSY  1 
AT2G28550.1              (  285) NFEMSSY  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 2.5e-075 
  -694   -547   -564   -727   -687   -646   -501   -619   -630   -687   -661    397   -657   -632   -687   -611   -607   -668   -634   -685 
  -676   -487   -713   -753    464   -694   -646   -524   -714   -472   -525   -753   -664   -735   -737   -728   -703   -568   -492   -395 
  -356   -567    252    183   -634   -469   -425    -17   -280   -490   -437      2    218   -249   -444   -447   -398    141   -645   -569 
  -476   -339   -751   -725   -464   -751   -801    399   -687   -280    300   -737   -708   -740   -775   -739   -460    259   -688   -629 
  -437   -448    162    -77   -601    -18   -341   -606   -342   -612   -589    143   -479   -376   -472    152    195   -582   -626   -509 
  -439   -449    269   -337   -605   -353   -343   -610   -337   -615   -593    167   -481   -377    235    -12   -374   -585   -627   -511 
  -812   -612   -776   -854   -441   -731   -607   -723   -785   -679   -713   -792   -730   -766   -773   -847   -781   -738   -505    470 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 2.5e-075 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.333333  0.200000  0.000000  0.000000  0.000000  0.033333  0.000000  0.000000  0.000000  0.066667  0.233333  0.000000  0.000000  0.000000  0.000000  0.133333  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.566667  0.000000  0.000000  0.166667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.266667  0.000000  0.000000 
 0.000000  0.000000  0.166667  0.033333  0.000000  0.066667  0.000000  0.000000  0.000000  0.000000  0.000000  0.166667  0.000000  0.000000  0.000000  0.333333  0.233333  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.366667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.200000  0.000000  0.000000  0.333333  0.100000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif NFDISDY MEME-8 regular expression
--------------------------------------------------------------------------------
NF[DPE][IV][ST][DRN]Y
--------------------------------------------------------------------------------




Time 29.22 secs.

********************************************************************************


********************************************************************************
MOTIF YRGVTRH MEME-9	width =   7  sites =  27  llr = 447  E-value = 5.4e-073
********************************************************************************
--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 Description
--------------------------------------------------------------------------------
Simplified        A  ::::4::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  :::::::
                  F  :::::2:
                  G  ::a::::
                  H  ::::::6
                  I  :::1:::
                  K  :::::1:
                  L  :::::1:
                  M  :::::::
                  N  :::::::
                  P  :::::::
                  Q  :1::::1
                  R  :9:::6:
                  S  1::::::
                  T  ::::6::
                  V  :::9:::
                  W  :::::::
                  Y  9:::::3

         bits    6.6        
                 5.9        
                 5.2        
                 4.6        
Relative         3.9 * **   
Entropy          3.3 ****  *
(23.9 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           YRGVTRH
consensus                AFY
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 232  8.81e-10 VETLGQRTSI YRGVTRH RWTGRYEAHL
AT5G57390.1                 204  8.81e-10 VESFGQRTSI YRGVTRH RWTGRYEAHL
AT5G17430.1                 313  8.81e-10 SSGFSRGASI YRGVTRH HQHGRWQARI
AT5G10510.3                 269  8.81e-10 ADTFGQRTSI YRGVTRH RWTGRYEAHL
AT5G10510.2                 269  8.81e-10 ADTFGQRTSI YRGVTRH RWTGRYEAHL
AT5G10510.1                 254  8.81e-10 ADTFGQRTSI YRGVTRH RWTGRYEAHL
AT4G37750.1                 284  8.81e-10 IDTFGQRTSQ YRGVTRH RWTGRYEAHL
AT3G20840.1                 182  8.81e-10 LDTFGQRTSI YRGVTRH RWTGRYEAHL
AT1G72570.1                 224  8.81e-10 VDSYGQRTSQ YRGVTRH RWTGRYEAHL
AT1G51190.1                 191  8.81e-10 LETFGQRTSI YRGVTRH RWTGRYEAHL
AT3G54320.3                 168  2.65e-09 SSGFSRGVSK YRGVARH HHNGRWEARI
AT3G54320.1                 168  2.65e-09 SSGFSRGVSK YRGVARH HHNGRWEARI
AT1G79700.2                 155  2.65e-09 SSGFSRGVSK YRGVARH HHNGRWEARI
AT1G79700.1                 155  2.65e-09 SSGFSRGVSK YRGVARH HHNGRWEARI
AT5G67180.1                  97  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT4G36920.2                 132  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT4G36920.1                 132  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT2G28550.3                 154  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT2G28550.2                 154  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT2G28550.1                 154  6.56e-09 RRGPRSRSSQ YRGVTFY RRTGRWESHI
AT1G16060.1                 161  7.50e-09 SSGFSRGVSK YRGVAKH HHNGRWEARI
AT2G41710.3                 202  7.75e-07 ASLRRKSSGF SRGIAKY RGLQSRWDAS
AT2G41710.2                 172  7.75e-07 YPFGRKSSGF SRGIAKY RGLQSRWDAS
AT2G41710.1                 167  7.75e-07 ASLRRKSSGF SRGIAKY RGLQSRWDAS
AT5G60120.2                 253  1.95e-06 SSGFSRNNSR YQGVALQ KIGGWGAQME
AT5G60120.1                 253  1.95e-06 SSGFSRNNSR YQGVALQ KIGGWGAQME
AT3G54990.1                 292  1.31e-05 ESIKLTTGDY YKGINRS TMGLYGKQSS
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       8.8e-10  231_[9]_260
AT5G57390.1                       8.8e-10  203_[9]_348
AT5G17430.1                       8.8e-10  312_[9]_265
AT5G10510.3                       8.8e-10  268_[9]_329
AT5G10510.2                       8.8e-10  268_[9]_306
AT5G10510.1                       8.8e-10  253_[9]_309
AT4G37750.1                       8.8e-10  283_[9]_265
AT3G20840.1                       8.8e-10  181_[9]_386
AT1G72570.1                       8.8e-10  223_[9]_185
AT1G51190.1                       8.8e-10  190_[9]_371
AT3G54320.3                       2.6e-09  167_[9]_256
AT3G54320.1                       2.6e-09  167_[9]_264
AT1G79700.2                       2.6e-09  154_[9]_152
AT1G79700.1                       2.6e-09  154_[9]_142
AT5G67180.1                       6.6e-09  96_[9]_249
AT4G36920.2                       6.6e-09  131_[9]_294
AT4G36920.1                       6.6e-09  131_[9]_294
AT2G28550.3                       6.6e-09  153_[9]_304
AT2G28550.2                       6.6e-09  153_[9]_221
AT2G28550.1                       6.6e-09  153_[9]_289
AT1G16060.1                       7.5e-09  160_[9]_178
AT2G41710.3                       7.7e-07  201_[9]_250
AT2G41710.2                       7.7e-07  171_[9]_250
AT2G41710.1                       7.7e-07  166_[9]_250
AT5G60120.2                       1.9e-06  252_[9]_248
AT5G60120.1                       1.9e-06  252_[9]_226
AT3G54990.1                       1.3e-05  291_[9]_48
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF YRGVTRH width=7 seqs=27
AT5G65510.1              (  232) YRGVTRH  1 
AT5G57390.1              (  204) YRGVTRH  1 
AT5G17430.1              (  313) YRGVTRH  1 
AT5G10510.3              (  269) YRGVTRH  1 
AT5G10510.2              (  269) YRGVTRH  1 
AT5G10510.1              (  254) YRGVTRH  1 
AT4G37750.1              (  284) YRGVTRH  1 
AT3G20840.1              (  182) YRGVTRH  1 
AT1G72570.1              (  224) YRGVTRH  1 
AT1G51190.1              (  191) YRGVTRH  1 
AT3G54320.3              (  168) YRGVARH  1 
AT3G54320.1              (  168) YRGVARH  1 
AT1G79700.2              (  155) YRGVARH  1 
AT1G79700.1              (  155) YRGVARH  1 
AT5G67180.1              (   97) YRGVTFY  1 
AT4G36920.2              (  132) YRGVTFY  1 
AT4G36920.1              (  132) YRGVTFY  1 
AT2G28550.3              (  154) YRGVTFY  1 
AT2G28550.2              (  154) YRGVTFY  1 
AT2G28550.1              (  154) YRGVTFY  1 
AT1G16060.1              (  161) YRGVAKH  1 
AT2G41710.3              (  202) SRGIAKY  1 
AT2G41710.2              (  172) SRGIAKY  1 
AT2G41710.1              (  167) SRGIAKY  1 
AT5G60120.2              (  253) YQGVALQ  1 
AT5G60120.1              (  253) YQGVALQ  1 
AT3G54990.1              (  292) YKGINRS  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 9.4959 E= 5.4e-073 
  -580   -477   -695   -740   -255   -645   -445   -560   -669   -528   -543   -641   -663   -632   -665     -2   -619   -567   -332    452 
  -374   -220   -460   -455   -477   -445   -254   -351    -58   -369   -355   -383   -372    -76    386   -447   -386   -431   -316   -444 
  -490   -496   -538   -611   -677    367   -609   -642   -563   -675   -618   -555   -612   -639   -599   -590   -611   -612   -603   -664 
  -402   -297   -671   -645   -455   -687   -687    217   -617   -282   -307   -680   -630   -673   -672   -674   -407    417   -661   -613 
   223   -245   -545   -591   -587   -384   -579   -493   -557   -554   -468    -78   -484   -533   -581   -330    333   -386   -599   -633 
  -441   -435   -533   -381    234   -523   -337   -416    176     12   -365   -416   -519   -246    310   -492   -402   -418   -454   -404 
  -458   -310   -375   -426   -192   -496    420   -410   -419   -358   -320   -261   -461     49   -319   -177   -387   -397   -248    276 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 27 E= 5.4e-073 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.111111  0.000000  0.000000  0.000000  0.888889 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.037037  0.000000  0.000000  0.000000  0.000000  0.074074  0.888889  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.148148  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.851852  0.000000  0.000000 
 0.370370  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.037037  0.000000  0.000000  0.000000  0.000000  0.592593  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.222222  0.000000  0.000000  0.000000  0.148148  0.074074  0.000000  0.000000  0.000000  0.000000  0.555556  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.555556  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.074074  0.000000  0.037037  0.000000  0.000000  0.000000  0.333333 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif YRGVTRH MEME-9 regular expression
--------------------------------------------------------------------------------
YRGV[TA][RF][HY]
--------------------------------------------------------------------------------




Time 32.58 secs.

********************************************************************************


********************************************************************************
MOTIF LTKZEFV MEME-10	width =   7  sites =  30  llr = 457  E-value = 1.3e-069
********************************************************************************
--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 Description
--------------------------------------------------------------------------------
Simplified        A  :::::::
pos.-specific     C  :::::::
probability       D  :::::::
matrix            E  :::6a::
                  F  :::::6:
                  G  :::::::
                  H  :::::::
                  I  ::::::3
                  K  ::7::::
                  L  5:::::2
                  M  3::::::
                  N  :1:::::
                  P  :::::::
                  Q  1::3:::
                  R  ::3::::
                  S  :4:::::
                  T  :5:::::
                  V  1::1:15
                  W  :::::::
                  Y  :::::4:

         bits    6.6        
                 5.9        
                 5.2        
                 4.6        
Relative         3.9     *  
Entropy          3.3   * ** 
(22.0 bits)      2.6 *******
                 2.0 *******
                 1.3 *******
                 0.7 *******
                 0.0 -------

Multilevel           LTKEEFV
consensus            MSRQ YI
sequence                    
                            
                            
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value             Site
-------------             ----- ---------            -------
AT5G65510.1                 311  3.30e-09 YSKELEEMNH MTKQEFI ASLRRKSSGF
AT5G10510.3                 368  3.30e-09 YSKEVEEMKH MTKQEFI ASLRRKSSGF
AT5G10510.2                 345  3.30e-09 YSKEVEEMKH MTKQEFI ASLRRKSSGF
AT5G10510.1                 333  3.30e-09 YSKEVEEMKH MTKQEFI ASLRRKSSGF
AT4G36920.2                 201  3.30e-09 YDDDLKQMTN LTKEEFV HVLRRQSTGF
AT4G36920.1                 201  3.30e-09 YDDDLKQMTN LTKEEFV HVLRRQSTGF
AT5G57390.1                 283  1.04e-08 YESELEEMKH MTRQEFV ASLRRKSSGF
AT3G20840.1                 261  1.04e-08 YEKEVEEMKH MTRQEFV AAIRRKSSGF
AT1G51190.1                 270  1.04e-08 YEKEVEEMKN MTRQEFV ASIRRKSSGF
AT5G17430.1                 290  1.80e-08 YEKEVEEMKH MTRQEYV ASLRRKSSGF
AT4G37750.1                 363  1.80e-08 YQKEIEDMKN MTRQEYV AHLRRKSSGF
AT2G39250.1                 178  1.80e-08 YKQDIEKMKN LSKEEFV QSLRRASASL
AT2G28550.3                 223  1.80e-08 YEEDMKQVQN LSKEEFV HILRRQSTGF
AT2G28550.2                 223  1.80e-08 YEEDMKQVQN LSKEEFV HILRRQSTGF
AT2G28550.1                 223  1.80e-08 YEEDMKQVQN LSKEEFV HILRRQSTGF
AT5G67180.1                 166  6.34e-08 YLDDLKQMGN LTKEEFM HVLRRQSTGF
AT1G72570.1                 303  1.19e-07 YEKEIEELNN MNRQEFV AMLRRNSSGF
AT1G79700.2                 132  1.49e-07 YDEDVKEMEG QSKEEYI GSLRRKSSGF
AT1G79700.1                 132  1.49e-07 YDEDVKEMEG QSKEEYI GSLRRKSSGF
AT1G16060.2                  68  1.49e-07 YEEDIKEMES QSKEEYI GSLRRKSSGF
AT1G16060.1                 138  1.49e-07 YEEDIKEMES QSKEEYI GSLRRKSSGF
AT5G60120.2                 230  2.00e-07 YEEDLKQMAN LSKEEVV QVLRRQSSGF
AT5G60120.1                 230  2.00e-07 YEEDLKQMAN LSKEEVV QVLRRQSSGF
AT3G54320.3                 145  2.47e-07 YTKELEEMQR VTKEEYL ASLRRQSSGF
AT3G54320.1                 145  2.47e-07 YTKELEEMQR VTKEEYL ASLRRQSSGF
AT2G41710.3                 185  3.08e-07 YTRDLEEMQN LSREEYL ASLRRKSSGF
AT2G41710.2                 150  3.08e-07 YTRDLEEMQN LSREEYL ASLRRYPFGR
AT2G41710.1                 150  3.08e-07 YTRDLEEMQN LSREEYL ASLRRKSSGF
AT3G54990.2                 192  3.23e-07 YRHDIDKMKN LNKVEFV QTLRRESASF
AT3G54990.1                 192  3.23e-07 YRHDIDKMKN LNKVEFV QTLRRESASF
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT5G65510.1                       3.3e-09  310_[10]_181
AT5G10510.3                       3.3e-09  367_[10]_230
AT5G10510.2                       3.3e-09  344_[10]_230
AT5G10510.1                       3.3e-09  332_[10]_230
AT4G36920.2                       3.3e-09  200_[10]_225
AT4G36920.1                       3.3e-09  200_[10]_225
AT5G57390.1                         1e-08  282_[10]_269
AT3G20840.1                         1e-08  260_[10]_307
AT1G51190.1                         1e-08  269_[10]_292
AT5G17430.1                       1.8e-08  289_[10]_288
AT4G37750.1                       1.8e-08  362_[10]_186
AT2G39250.1                       1.8e-08  177_[10]_141
AT2G28550.3                       1.8e-08  222_[10]_235
AT2G28550.2                       1.8e-08  222_[10]_152
AT2G28550.1                       1.8e-08  222_[10]_220
AT5G67180.1                       6.3e-08  165_[10]_180
AT1G72570.1                       1.2e-07  302_[10]_106
AT1G79700.2                       1.5e-07  131_[10]_175
AT1G79700.1                       1.5e-07  131_[10]_165
AT1G16060.2                       1.5e-07  67_[10]_201
AT1G16060.1                       1.5e-07  137_[10]_201
AT5G60120.2                         2e-07  229_[10]_271
AT5G60120.1                         2e-07  229_[10]_249
AT3G54320.3                       2.5e-07  144_[10]_279
AT3G54320.1                       2.5e-07  144_[10]_287
AT2G41710.3                       3.1e-07  184_[10]_267
AT2G41710.2                       3.1e-07  149_[10]_272
AT2G41710.1                       3.1e-07  149_[10]_267
AT3G54990.2                       3.2e-07  191_[10]_49
AT3G54990.1                       3.2e-07  191_[10]_148
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF LTKZEFV width=7 seqs=30
AT5G65510.1              (  311) MTKQEFI  1 
AT5G10510.3              (  368) MTKQEFI  1 
AT5G10510.2              (  345) MTKQEFI  1 
AT5G10510.1              (  333) MTKQEFI  1 
AT4G36920.2              (  201) LTKEEFV  1 
AT4G36920.1              (  201) LTKEEFV  1 
AT5G57390.1              (  283) MTRQEFV  1 
AT3G20840.1              (  261) MTRQEFV  1 
AT1G51190.1              (  270) MTRQEFV  1 
AT5G17430.1              (  290) MTRQEYV  1 
AT4G37750.1              (  363) MTRQEYV  1 
AT2G39250.1              (  178) LSKEEFV  1 
AT2G28550.3              (  223) LSKEEFV  1 
AT2G28550.2              (  223) LSKEEFV  1 
AT2G28550.1              (  223) LSKEEFV  1 
AT5G67180.1              (  166) LTKEEFM  1 
AT1G72570.1              (  303) MNRQEFV  1 
AT1G79700.2              (  132) QSKEEYI  1 
AT1G79700.1              (  132) QSKEEYI  1 
AT1G16060.2              (   68) QSKEEYI  1 
AT1G16060.1              (  138) QSKEEYI  1 
AT5G60120.2              (  230) LSKEEVV  1 
AT5G60120.1              (  230) LSKEEVV  1 
AT3G54320.3              (  145) VTKEEYL  1 
AT3G54320.1              (  145) VTKEEYL  1 
AT2G41710.3              (  185) LSREEYL  1 
AT2G41710.2              (  150) LSREEYL  1 
AT2G41710.1              (  150) LSREEYL  1 
AT3G54990.2              (  192) LNKVEFV  1 
AT3G54990.1              (  192) LNKVEFV  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 7 n= 13159 bayes= 8.77358 E= 1.3e-069 
  -564   -424   -838   -762   -287   -776   -670   -176   -703    284    401   -788   -684    144   -698   -778   -548     60   -470   -516 
  -308   -251   -369   -456   -489   -428   -437   -343   -385   -460   -335     46   -460   -407   -451    178    309   -319   -500   -519 
  -468   -463   -557   -407   -636   -544   -369   -466    381   -455   -411   -441   -541   -272    226   -519   -429   -459   -520   -521 
  -363   -664   -176    322   -703   -512   -469   -497   -289   -511   -458   -448   -454    272   -467   -489   -427     44   -701   -623 
  -523   -492   -241    395   -614   -559   -513   -481   -552   -589   -541   -490   -639   -412   -596   -625   -552   -522   -583   -619 
  -663   -458   -704   -711    379   -705   -358   -472   -625   -440   -458   -599   -669   -572   -615   -674   -615     51   -239    327 
  -491   -354   -774   -736   -399   -755   -754    294   -696    138     81   -750   -701   -701   -755   -747   -475    352   -600   -593 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 7 nsites= 30 E= 1.3e-069 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.466667  0.333333  0.000000  0.000000  0.133333  0.000000  0.000000  0.000000  0.066667  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.100000  0.000000  0.000000  0.000000  0.433333  0.466667  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.700000  0.000000  0.000000  0.000000  0.000000  0.000000  0.300000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.600000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.066667  0.000000  0.000000 
 0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.566667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.066667  0.000000  0.366667 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.266667  0.000000  0.166667  0.033333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.533333  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif LTKZEFV MEME-10 regular expression
--------------------------------------------------------------------------------
[LM][TS][KR][EQ]E[FY][VI]
--------------------------------------------------------------------------------




Time 35.88 secs.

********************************************************************************


********************************************************************************
SUMMARY OF MOTIFS
********************************************************************************

--------------------------------------------------------------------------------
	Combined block diagrams: non-overlapping sites with p-value < 0.0001
--------------------------------------------------------------------------------
SEQUENCE NAME            COMBINED P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
AT1G16060.1                      1.57e-45  58_[2(7.83e-09)]_4_[1(7.32e-10)]_12_\
    [3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(1.31e-05)]_9_[10(1.49e-07)]_3_\
    [5(6.57e-09)]_6_[9(7.50e-09)]_3_[7(1.12e-09)]_5_[3(1.66e-05)]_10_\
    [4(1.12e-09)]_9_[8(8.18e-09)]_123
AT1G16060.2                      3.90e-41  18_[3(9.19e-07)]_14_[6(1.26e-09)]_5_\
    [8(1.31e-05)]_9_[10(1.49e-07)]_3_[5(6.57e-09)]_6_[9(7.50e-09)]_3_\
    [7(1.12e-09)]_5_[3(1.66e-05)]_10_[4(1.12e-09)]_9_[8(8.18e-09)]_123
AT1G51190.1                      2.91e-46  190_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(2.20e-08)]_9_[10(1.04e-08)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(2.89e-08)]_88_[8(5.75e-05)]_119
AT1G72570.1                      4.45e-46  223_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(9.00e-07)]_9_[10(1.19e-07)]_3_\
    [5(5.08e-08)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(9.40e-09)]_28
AT1G79700.1                      4.48e-47  52_[2(8.81e-10)]_4_[1(7.32e-10)]_12_\
    [3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(2.72e-05)]_9_[10(1.49e-07)]_3_\
    [5(6.57e-09)]_6_[9(2.65e-09)]_3_[7(1.12e-09)]_12_[4(1.12e-09)]_9_\
    [8(5.16e-08)]_97
AT1G79700.2                      6.11e-47  52_[2(8.81e-10)]_4_[1(7.32e-10)]_12_\
    [3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(2.72e-05)]_9_[10(1.49e-07)]_3_\
    [5(6.57e-09)]_6_[9(2.65e-09)]_3_[7(1.12e-09)]_5_[3(1.66e-05)]_10_\
    [4(1.12e-09)]_9_[8(5.16e-08)]_97
AT2G28550.1                      1.25e-42  153_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(1.86e-05)]_9_[10(1.80e-08)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.75e-09)]_7_[4(2.68e-09)]_9_\
    [8(2.26e-07)]_158
AT2G28550.2                      2.65e-43  153_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(1.86e-05)]_9_[10(1.80e-08)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.75e-09)]_7_[4(2.68e-09)]_9_\
    [8(2.26e-07)]_90
AT2G28550.3                      1.70e-42  153_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(1.86e-05)]_9_[10(1.80e-08)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.75e-09)]_5_[3(3.96e-05)]_10_\
    [4(2.68e-09)]_9_[8(2.26e-07)]_158
AT2G39250.1                      4.58e-37  108_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(1.86e-07)]_9_[10(1.80e-08)]_116_\
    [5(2.29e-05)]_18
AT2G41710.1                      1.99e-41  70_[2(8.81e-10)]_4_[1(7.32e-10)]_12_\
    [3(1.48e-09)]_14_[6(1.26e-09)]_5_[8(3.59e-08)]_9_[10(3.08e-07)]_3_\
    [5(6.57e-09)]_[9(7.75e-07)]_4_[7(2.11e-06)]_39_[6(2.77e-08)]_193
AT2G41710.2                      5.46e-40  70_[2(8.81e-10)]_4_[1(7.32e-10)]_12_\
    [3(1.48e-09)]_14_[6(1.26e-09)]_5_[8(3.59e-08)]_9_[10(3.08e-07)]_8_\
    [5(2.07e-07)]_[9(7.75e-07)]_4_[7(2.11e-06)]_39_[6(2.77e-08)]_193
AT2G41710.3                      1.67e-38  70_[2(7.83e-09)]_39_[1(7.32e-10)]_\
    12_[3(1.48e-09)]_14_[6(1.26e-09)]_5_[8(3.59e-08)]_9_[10(3.08e-07)]_3_\
    [5(6.57e-09)]_[9(7.75e-07)]_4_[7(2.11e-06)]_39_[6(2.77e-08)]_193
AT3G20840.1                      3.21e-46  181_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(2.20e-08)]_9_[10(1.04e-08)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(2.89e-08)]_81_[8(4.98e-05)]_141
AT3G54320.1                      6.78e-45  65_[2(8.81e-10)]_4_[1(2.07e-09)]_12_\
    [3(1.48e-09)]_14_[6(1.26e-09)]_5_[8(4.35e-05)]_9_[10(2.47e-07)]_3_\
    [5(1.29e-08)]_6_[9(2.65e-09)]_3_[7(1.12e-09)]_5_[3(1.66e-05)]_10_\
    [4(3.31e-09)]_9_[8(2.20e-08)]_209
AT3G54320.3                      5.70e-45  65_[2(8.81e-10)]_4_[1(2.07e-09)]_12_\
    [3(1.48e-09)]_14_[6(1.26e-09)]_5_[8(4.35e-05)]_9_[10(2.47e-07)]_3_\
    [5(1.29e-08)]_6_[9(2.65e-09)]_3_[7(1.12e-09)]_5_[3(1.66e-05)]_10_\
    [4(3.31e-09)]_9_[8(2.20e-08)]_201
AT3G54990.1                      4.28e-38  122_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(8.46e-08)]_9_[10(3.23e-07)]_3_\
    [5(2.43e-06)]_6_[9(4.19e-05)]_21_[6(7.87e-07)]_42_[9(1.31e-05)]_23_\
    [5(5.50e-05)]_18
AT3G54990.2                      1.78e-39  122_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(8.46e-08)]_9_[10(3.23e-07)]_3_\
    [5(2.43e-06)]_6_[9(4.19e-05)]_26
AT4G36920.1                      6.50e-44  131_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(7.60e-08)]_9_[10(3.30e-09)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.75e-09)]_5_[3(4.37e-06)]_10_\
    [4(2.68e-09)]_9_[8(9.30e-05)]_148
AT4G36920.2                      6.50e-44  131_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(7.60e-08)]_9_[10(3.30e-09)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.75e-09)]_5_[3(4.37e-06)]_10_\
    [4(2.68e-09)]_9_[8(9.30e-05)]_148
AT4G37750.1                      5.20e-46  283_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(6.65e-05)]_9_[10(1.80e-08)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.03e-08)]_9_[8(3.24e-09)]_108
AT5G10510.1                      6.73e-46  253_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(9.58e-09)]_5_[8(2.20e-08)]_9_[10(3.30e-09)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(7.60e-08)]_152
AT5G10510.2                      8.32e-43  268_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    30_[6(9.58e-09)]_5_[8(2.20e-08)]_9_[10(3.30e-09)]_3_[5(6.57e-09)]_6_\
    [2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_[4(1.12e-09)]_9_\
    [8(7.60e-08)]_152
AT5G10510.3                      7.74e-43  268_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.52e-06)]_34_[6(9.58e-09)]_5_[8(2.20e-08)]_9_[10(3.30e-09)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(7.60e-08)]_152
AT5G17430.1                      1.08e-45  210_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(8.68e-06)]_9_[10(1.80e-08)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(3.90e-08)]_210
AT5G57390.1                      9.77e-47  203_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(3.59e-08)]_9_[10(1.04e-08)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(8.18e-09)]_191
AT5G60120.1                      8.26e-38  160_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(2.08e-08)]_9_[8(1.11e-07)]_9_[10(2.00e-07)]_3_\
    [5(1.29e-08)]_6_[9(1.95e-06)]_2_[7(7.57e-07)]_11_[6(9.53e-07)]_199
AT5G60120.2                      1.25e-37  160_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(2.08e-08)]_9_[8(1.11e-07)]_9_[10(2.00e-07)]_3_\
    [5(1.29e-08)]_6_[9(1.95e-06)]_2_[7(7.57e-07)]_11_[6(9.53e-07)]_221
AT5G65510.1                      9.17e-47  231_[2(8.81e-10)]_4_[1(7.32e-10)]_\
    12_[3(3.34e-09)]_14_[6(1.26e-09)]_5_[8(2.26e-07)]_9_[10(3.30e-09)]_3_\
    [5(6.57e-09)]_6_[2(8.81e-10)]_3_[7(4.76e-10)]_5_[3(5.63e-06)]_10_\
    [4(1.12e-09)]_9_[8(7.60e-08)]_103
AT5G67180.1                      1.01e-41  96_[2(4.85e-09)]_4_[1(7.32e-10)]_2_\
    [3(1.48e-09)]_10_[4(5.28e-09)]_9_[8(6.98e-08)]_9_[10(6.34e-08)]_3_\
    [5(1.95e-08)]_6_[2(2.40e-09)]_2_[7(1.81e-07)]_5_[3(4.37e-06)]_10_\
    [4(2.68e-09)]_119
--------------------------------------------------------------------------------

********************************************************************************


********************************************************************************
Stopped because requested number of motifs (10) found.
********************************************************************************

CPU: plantomix

********************************************************************************
