add_offset              Add offset
bases2genotypes         Transform bases into genotypes
calcRec                 Recombination frequencies computation
calcSarf                Calculates the SARF value of given input.
maketangle              Create a gray scale tanglegram
map2dend                Transforming a map into a dendrogram
pergola                 Toolbox for polyploid genetic data
plotChr                 Plotting one or two linkage maps
plotRf                  Plot recombination frequencies
pullMap                 Creates map object
shuffleInput            Randomize marker order and alleles within
                        samples In simulated datasets, the order or
                        markers and alleles within samples is often
                        given. To remove any prior knowledge, that
                        would not be available, the data should be
                        randomized. Thus, the performance of our tool
                        can be validated unbiased.
simHexa                 Hexaploid F2 population
simTetra                Tetraploid F2 population
sortLeafs               Chromosome wise leaf ordering
splitChr                Split markers into chromosomes
swapChrs                Swap chromosomes
switchChrs              Switch Chromosomes
