spgs-package	spgs-package
ag.test	ag.test
agct.test	agct.test
array2vector	array2vector
chargaff.gibbs.test	chargaff.gibbs.test
chargaff0.test	chargaff0.test
chargaff1.test	chargaff1.test
chargaff2.test	chargaff2.test
chisq.unif.test	chisq.unif.test
complement	complement
complement.default	complement
complement.list	complement
complement.SeqFastadna	complement
cylinder.counts	cylinder.counts
diffsign.test	diffsign.test
diid.disturbance	diid.disturbance
diid.test	diid.test
disambiguate	disambiguate
disambiguate.default	disambiguate
disambiguate.list	disambiguate
disambiguate.SeqFastadna	disambiguate
estimateMarkovChain	estimateMarkovChain
ks.unif.test	ks.unif.test
lb.test	lb.test
markov.disturbance	markov.disturbance
markov.test	markov.test
nanoarchaeum	nanoarchaeum
oligoCorr	oligoProfile
oligoProfile	oligoProfile
pair.counts	pair.counts
pieris	pieris
plot.OligoProfile	oligoProfile
print.OligoProfile	oligoProfile
quadruple.counts	quadruple.counts
rank.test	rank.test
rcspr2mat	rcspr2mat
reverseComplement	reverseComplement
reverseComplement.default	reverseComplement
reverseComplement.list	reverseComplement
reverseComplement.SeqFastadna	reverseComplement
rstochmat	rstochmat
rstochvec	rstochvec
simulateMarkovChain	simulateMarkovChain
spgs	spgs-package
table2vector	array2vector
triple.counts	triple.counts
turningpoint.test	turningpoint.test
