f68cb1f78029e6bf944d3e5bcd78a38f *DESCRIPTION
6d44b08299603c57e8586f2f91e78189 *NAMESPACE
c613f064974eed289598226f78e1cc77 *R/CCT.R
ed36f6d34224372ae15bc11c559feb2b *R/DenseGRM.R
1a30d5a02c2308c5432deb901403e356 *R/GRAB_Marker.R
1ab83f9549200a7ba638d4b2e0ff9da9 *R/GRAB_Null_Model.R
a47bceba633796f5f2f19a5ed717e5f2 *R/GRAB_Region.R
464a1d011e1e6ad4c98fa3466312e75c *R/GRAB_Simu.R
956116ca84502040f72741d0ca47f4b1 *R/Geno.R
be33866b3dc2b95a009efec299116beb *R/POLMM.R
d7f085d3b42bc7994e2aac365aa7c08d *R/PairwiseIBD.R
eeb604e3f8b7c252c298b9431450b4ff *R/RcppExports.R
04bee7c20827447c8c2b0c3ab8900eb1 *R/SAGELD.R
81c2395643bc5a1a05e86c091e691718 *R/SPACox.R
75bdde458f76fde008a938d4230e107c *R/SPAGRM.R
fc01e8c7309c4fa6b572c4e1f533f0d0 *R/SPAmix.R
ea4568cf75c1d29f8ccec5a5b3165872 *R/SparseGRM.R
2f8c752b93bdfc9bc99487b9e83409a5 *R/Util.R
debce57132442ee85c4e838ccf6916f6 *R/WtCoxG.R
f70156b81318c864eb1e48d0ac2db2f8 *R/control.R
dd39696df96cd23715fc3d4bb263a10e *R/formula.R
4b490b2586d2fb8856618e6a145b8bb8 *R/zzz.R
63a2ad44c449db262720341bc933537d *README.md
0d32c38035ce730bd8913edffbe380ba *inst/extdata/IDsToInclude.txt
b724d5e25d7442f247b47de22b3d9369 *inst/extdata/PairwiseIBD.txt
ae9e6682b5ba40a590a938203c726c52 *inst/extdata/RangesToInclude.txt
49ef79a6e57f7275c109b742540aaf8e *inst/extdata/ResidMat.txt
0e208b1e4c3ceef5271b3e1e744c3001 *inst/extdata/SparseGRM.txt
75c4c8a36bdfbfd3aedf776062b427f7 *inst/extdata/example_10-members.kin.txt
000ddcd30cca4a405c8139662fd7816e *inst/extdata/example_20-members.kin.txt
bc779a33e0f05d5ca06d06ad28c3356a *inst/extdata/example_4-members.kin.txt
05382e65356ee18b0a96e7af4d6d687c *inst/extdata/example_n1000_m236.IDsToInclude
9e76a1b0e489111df8ed09c813e04b0d *inst/extdata/example_n1000_m236.bed
70cd9378db05e4b0db76c494478bd552 *inst/extdata/example_n1000_m236.bgen
87668c88ee35dc02dbcf0043417e328a *inst/extdata/example_n1000_m236.bgen.bgi
d82badd5a2fded40ded1c3af1dd09f96 *inst/extdata/example_n1000_m236.bim
407d1a3b4845fef4e0d8c3f603ec66b3 *inst/extdata/example_n1000_m236.fam
690ad9c55a88d81e9889ff082f072de5 *inst/extdata/example_n1000_m236.sample
482027274f4c597a7252fb57f44aa9b0 *inst/extdata/objPOLMMnull.RData
fd20b8464dad192dc2231b2685c52ad0 *inst/extdata/simuBGEN.bgen
6c26cd41efd1a237833a840610f7d78e *inst/extdata/simuBGEN.bgen.bgi
af1323d7a700ea716f0ddece08cb7ed3 *inst/extdata/simuBGEN.sample
a3125873bcc2c3a4a514983628468e74 *inst/extdata/simuGENO.IDsToInclude
3b14f63689ebc8dc240f433df8de7d89 *inst/extdata/simuLongPHENO.txt
48a8fa1a0b69684d464bd10b3e0148fb *inst/extdata/simuPHENO.txt
6f363dc193415a617fddf18fd308885f *inst/extdata/simuPLINK.bed
05f5548f0e9e01ed3142bc994e963ff2 *inst/extdata/simuPLINK.bim
6e6b8c65e83dea44a709049da528b695 *inst/extdata/simuPLINK.fam
57e6bb188ef6ccfa5702e5a4842f3814 *inst/extdata/simuPLINK.frq
abaaca337c43cce7f24a1631222771c1 *inst/extdata/simuPLINK_RV.bed
194d3b0572e6821cd2deac065327c667 *inst/extdata/simuPLINK_RV.bim
6e6b8c65e83dea44a709049da528b695 *inst/extdata/simuPLINK_RV.fam
c7b6e42b83211befc28c2eb74480423a *inst/extdata/simuPLINK_RV.frq
cea7035284179ee09df37b90af6dd8d2 *inst/extdata/simuPLINK_RV.group
6bd7b85e00baf3f5bcde5ddb787ab6af *inst/extdata/simuRAW.raw.gz
4e2b88c5830dfd8ee2e72ae25dd27df3 *inst/extdata/simuRefAf.txt
984883aea39fa7d77c41835305254e42 *man/Batcheffect.Test.Rd
369cdc5f41d23dcedf41813a2f461077 *man/CCT.Rd
47151a85db7b25764b9016e9c36ccc71 *man/GRAB.Marker.Rd
12ae87c031fd089be5f6bf168ae567e5 *man/GRAB.NullModel.Rd
b543158db06a9bf45c6d934b8cf0b32b *man/GRAB.POLMM.Rd
fd0f92975ec7c905b6bd3fb83563f9c8 *man/GRAB.ReadGeno.Rd
69485d926c9bec1a46aaa13274140f96 *man/GRAB.Region.Rd
61203e8c41ce6e087b7b4c2cf12cda4b *man/GRAB.SAGELD.Rd
17469f3997d03dca13667de92cce11b2 *man/GRAB.SPACox.Rd
1ceaa2c6b23d5d7cd3a7b91b9c48c596 *man/GRAB.SPAGRM.Rd
5d7698d6a5d98ce99be88d9e249e534b *man/GRAB.SPAmix.Rd
f99887d04080f7cbc0b8d5f624488107 *man/GRAB.SimuGMat.Rd
02719069e8a7f4dd5f75fd19fdabd783 *man/GRAB.SimuGMatFromGenoFile.Rd
432d8a485382d0b9dd87ac8bc9e2d375 *man/GRAB.SimuPheno.Rd
6a668eca374fb2f8c47f1e957bca1d66 *man/GRAB.SimubVec.Rd
399344a34d6122b0a1c5378c429b3aa9 *man/GRAB.WtCoxG.Rd
85842e972de9c11f44a1a3faf2f851cf *man/GRAB.getGenoInfo.Rd
86efec185e4833401f24ffaaafdc6bdc *man/GRAB.makePlink.Rd
0a2ee3dec90a5b675419c253965e761b *man/SAGELD.NullModel.Rd
791a10db5cd981ed1f66690031eee10b *man/SPAGRM.NullModel.Rd
9ca1ff1b8fffef2ec0490959f2e3bba2 *man/TestforBatchEffect.Rd
f920f6243d1cb40dc2170d18978c0a2a *man/checkIfSampleIDsExist.Rd
d12b82d99dd5cebe216cdba1d7099c22 *man/getDenseGRM.Rd
99a6e0ff47710b56b32d10bec75f389d *man/getSampleIDsFromBGEN.Rd
c0bb0b32a84e711c277b3f29db3efec2 *man/getSparseGRM.Rd
3ebd4d3a6808814a332abc52cab3ada5 *man/getTempFilesFullGRM.Rd
a53ea757ea650dbb62d815a526790310 *man/getVersionFromBGEN.Rd
28e90745c85200578ab2195b2bfe72df *man/handleFormula.Rd
0d5b04267867e18d6381c6cdf4fa5820 *man/makeGroup.Rd
42217a7f7b1378ecc260001388c4171f *man/setDenseGRM.Rd
ddebea1afbb3086d17b67f6f1d1948ec *src/BGEN.cpp
8648c3b077c2b0c9549724a4468acc3a *src/BGEN.h
ec0bd0af6d79c058b01cedbad1745408 *src/DenseGRM.cpp
f51387efa99a271babda119840feb4da *src/DenseGRM.h
2c488c85244a56c24ad362bd00747273 *src/Main.cpp
b6348ea8dae0b6a488b6388ebfc4d5d0 *src/Makevars
4898fabb7b01e3dc4b5bf3ad428cdb2e *src/PLINK.cpp
453dcfa3ed5652704eaf76da7cc884fb *src/PLINK.h
6dfc25b9174188f45b83fff58ecbe279 *src/POLMM.cpp
fd1a91b65de62325a5235ff6e5a53187 *src/POLMM.h
7a5860e0247f5cb2358089e936415f2b *src/RcppExports.cpp
9838efe3a3636b3fe4ecf5414d238aa1 *src/SAGELD.cpp
2d6097aed2116bd42a4ee26d9f6a861e *src/SAGELD.h
51d83745bbfd2d597c5fe26b46c3a816 *src/SPACox.cpp
9615c762ef74646943f7d922a930980d *src/SPACox.h
dcd8a6e445e9421af6fb718ca59f7e2e *src/SPAGRM.cpp
fc3e3f93f962973b74f240e809b3f978 *src/SPAGRM.h
4ba06bf963fd4812e874168527495968 *src/SPAmix.cpp
16013ccfbdffaed4c74d768d4c659b75 *src/SPAmix.h
79ef6e553cdddc953ef444aac7c1aa56 *src/UTIL.cpp
a1ca3f57db81f8343fb5dc5760cd20b3 *src/UTIL.h
252bcaae9b0251aa6d5f2d378729ea11 *src/WtCoxG.cpp
944390435d01b0b387c225abec66ffa1 *src/WtCoxG.h
fa47d99054e5d634192feefbce956c1b *src/approxfun.h
