Last updated on 2026-05-23 02:52:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 15.20 | 260.80 | 276.00 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 10.96 | 130.64 | 141.60 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 29.00 | 404.47 | 433.47 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 28.00 | 380.93 | 408.93 | OK | |
| r-devel-windows-x86_64 | 1.0.0 | 19.00 | 252.00 | 271.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 17.05 | 249.76 | 266.81 | OK | |
| r-release-linux-x86_64 | 1.0.0 | 16.37 | 250.38 | 266.75 | OK | |
| r-release-macos-arm64 | 1.1.0 | 3.00 | 60.00 | 63.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 11.00 | 273.00 | 284.00 | OK | |
| r-release-windows-x86_64 | 1.1.0 | 21.00 | 242.00 | 263.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.0 | 4.00 | 71.00 | 75.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.0 | 11.00 | 176.00 | 187.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 28.00 | 344.00 | 372.00 | OK |
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘FAQs.Rmd’ using rmarkdown
--- finished re-building ‘FAQs.Rmd’
--- re-building ‘Pk_Pv_Pf_Serology_Tutorial.Rmd’ using rmarkdown
Quitting from Pk_Pv_Pf_Serology_Tutorial.Rmd:63-72 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `readRDS()`:
! cannot open the connection to 'https://raw.githubusercontent.com/dionnecargy/SeroTrackR/master/inst/extdata/random_forest_excludingLF016.rds'
---
Backtrace:
▆
1. └─SeroTrackR::runPlasmoPipeline(...)
2. └─SeroTrackR::classifyResults(...)
3. └─base::readRDS(antibody_model_excLF016)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Pk_Pv_Pf_Serology_Tutorial.Rmd' failed with diagnostics:
cannot open the connection to 'https://raw.githubusercontent.com/dionnecargy/SeroTrackR/master/inst/extdata/random_forest_excludingLF016.rds'
--- failed re-building ‘Pk_Pv_Pf_Serology_Tutorial.Rmd’
--- re-building ‘PvLDH_Tutorial.Rmd’ using rmarkdown
--- finished re-building ‘PvLDH_Tutorial.Rmd’
--- re-building ‘PvSeroApp_R_Tutorial.Rmd’ using rmarkdown
Quitting from PvSeroApp_R_Tutorial.Rmd:75-86 [runPvSeroPipeline with classification]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `readRDS()`:
! cannot open the connection to 'https://raw.githubusercontent.com/dionnecargy/SeroTrackR/master/inst/extdata/random_forest_excludingLF016.rds'
---
Backtrace:
▆
1. └─SeroTrackR::runPvSeroPipeline(...)
2. └─SeroTrackR::classifyResults(...)
3. └─base::readRDS(antibody_model_excLF016)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'PvSeroApp_R_Tutorial.Rmd' failed with diagnostics:
cannot open the connection to 'https://raw.githubusercontent.com/dionnecargy/SeroTrackR/master/inst/extdata/random_forest_excludingLF016.rds'
--- failed re-building ‘PvSeroApp_R_Tutorial.Rmd’
--- re-building ‘setup.Rmd’ using rmarkdown
[WARNING] Could not fetch resource ../man/figures/magpix_raw.jpeg
[WARNING] Could not fetch resource ../man/figures/bioplex_raw.jpeg
[WARNING] Could not fetch resource ../man/figures/plate_layout_1.jpeg
--- finished re-building ‘setup.Rmd’
SUMMARY: processing the following files failed:
‘Pk_Pv_Pf_Serology_Tutorial.Rmd’ ‘PvSeroApp_R_Tutorial.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc