Version 1.0.3
- Fixed a bug where a multiqc_data.jsonfile withreport_saved_raw_datacontaining arrays of data would break
the parser [#7]
Version 1.0.2
- Fixed a bug where a multiqc_data.jsonfile withreport_general_stats_datacontaining arrays of data would
break the parser [#7]
Version 1.0.1
- Fixed a bug when the plotsvector is not provided butsections = "plot"[#5]
Version 1.0.0
Breaking Changes
- Removed the plot_optskey from theload_multiqcfunction. Instead, the plots are returned as
list columns with nested data frames inside the returned data frame.
Users are then able to parse out summary statistics using normaldplyrandtidyrfunctions. Refer to the
vignette for examples. Also, instead of selecting plots using the names
of this argument, they are selected using the newplotsoption (documented below) [#1].
- Renamed “plots” to “plot” in the sectionsargument.
This ensures consistency with the data frame column names for plots,
which are “plot.XX”.
- metadata.sample_idis now always the first column in
the data frame, even if you have provided a metadata function.
New Features
- Added list_plots()utility function for listing the
available plots [#2].
- Added plot_parsersargument toload_multiqcwhich allows for custom parsers for diverse
plot types in MultiQC.
- Added plotsargument toload_multiqc,
which is a vector of plot identifiers to parse.
- Created a pkgdown website, which is available at https://multimeric.github.io/TidyMultiqc/.
- Added documentation for the plot parsers, which explains the format
of the nested data frame produced for each plot type.
- Added GitHub repository and issue tracker to package metadata [#3].
Bug fixes
- Fixed errors when the data frame contains no data (for example
because you only requested a single plot which isn’t present) [#2].