distributions3 0.2.3
- Updates to plotting functions for compatibility new version of
ggplot2(#111)
distributions3 0.2.2
- New PoissonBinomial()distribution, a generalization of
the binomial distribution. The Poisson binomial is characterized by n
independent Bernoulli trials but with potentially different success
probabilities. Thed/p/q/rfunctions
employ the efficient implementation from the PoissonBinomial
package, if available. In case it is not available, fallback computation
based on a normal approximation are provided - with a warning, by
default (#100).
- The prodist()methods for various count regression
objects now distinguish between computations for the classic pscl package and the
newer countreg
package (currently on R-Forge, soon to be released to CRAN).
- The simulate()method fordistributionobjects is now better aligned withsimulate.lm()in base R:
It now always returns adata.framewithseedattribute.
- New simulate()default method which leveragesprodist()and subsequently uses thesimulate()method fordistributionobjects.
- New prodist()methods fordistributionobjects which just returns the unmodifieddistributionobject itself.
- The format()method - and hence theprint()method - fordistributionobjects has
been simplified. For example, nowNormal(mu = 0, sigma = 1)is used instead ofNormal distribution (mu = 0, sigma = 1)in order to yield a more compact output, especially for vectors of
distributions (#101).
- Added an as.character()method which essentially callsformat(..., digits = 15, drop0trailing = TRUE). This mimics
the behavior and precision of base R for real vectors. Note that this
enables usingmatch()for distribution objects.
- Added a duplicated()method which relies on the
corresponding method for thedata.frameof parameters in a
distribution.
- Enabled the inclusion of distributionvectors as
columns intibbledata objects, see?vec_proxy.distributionfor further details and a practical
example.
- Fixed errors in notation of cumulative distribution function in the
documentation of HurdlePoisson()andHurdleNegativeBinomial()(by @dkwhu in #94 and #96).
- The prodist()method forglmobjects can
now also handlefamilyspecifications fromMASS::negative.binomial(theta)with fixedtheta(reported by Christian Kleiber).
- Replace ellipsisdependency byrlangas
the former will be deprecated/archived
(by @olivroy in
#105).
- Further small improvements in methods and manual pages.
distributions3 0.2.1
- New generics is_discrete()andis_continous()with methods for all distribution objects in
the package. Theis_discrete()methods returnTRUEfor every distribution that is discrete on the entire
support andFALSEotherwise. Analogously,is_continuous()returnsTRUEfor every
distribution that is continuous on the entire support andFALSEotherwise. Thus, for mixed discrete-continuous
distributions both methods should yieldFALSE(#90).
- New logical argument elementwise = NULLinapply_dpqr()and hence inherited incdf(),pdf(),log_pdf(), andquantile().
It provides type-safety when applying one of the functions to a vector
of distributionsdto a numeric argumentxwhere bothdandxare of length n > 1. By
settingelementwise = TRUEthe function is applied
element-by-element, also yielding a vector of length n. By settingelementwise = FALSEthe function is applied for all
combinations yielding an n-by-n matrix. The defaultelementwise = NULLcorresponds toFALSEifdandxare of different lengths andTRUEif the are of the same length n > 1 (#87).
- Extended support for various count data distributions, now
enompassing both the Poisson and negative binomial distributions along
with various adjustments for zero counts (hurdle, inflation, and
truncation, respectively). More details are provided in the following
items (#86).
- New d/p/q/rfunctions forhnbinom,zinbinom,ztnbinom, andztpoissimilar to the
correspondingnbinomandpoisfunctions from
base R.
- New HurdleNegativeBinomial(),ZINegativeBinomial(),ZTNegativeBinomial(),
andZTPoisson()distribution constructors along with the
corresponding S3 methods for the “usual” generics (exceptskewness()andkurtosis()).
- New prodist()methods for extracting the
fitted/predicted probability distributions from models estimated byhurdle(),zeroinfl(), andzerotrunc()objects from either thepsclpackage or thecountregpackage.
- Added argument prodist(..., sigma = "ML")to thelmmethod for extracting the fitted/predicted probability
distribution from a linear regression model. In the previous version theprodist()method always used the least-squares estimate of
the error variance (= residual sum of squares divided by the residual
degrees of freedom, n - k), as also reported by thesummary()method. Now the default is to use the
maximum-likelihood estimate instead (divided by the number of
observations, n) which is consistent with thelogLik()method. The previous behavior can be obtained by specifyingsigma = "OLS"(#91).
- Similarly to the lmmethod theglmmethodprodist(..., dispersion = NULL)now, by default, uses thedispersionestimate that matches thelogLik()output. This is based on the deviance divided by the number of
observations, n. Alternatively,dispersion = "Chisquared"uses the estimate employed in thesummary()method, based
on the Chi-squared statistic divided by the residual degrees of freedom,
n - k.
- Small improvements in methods for various distribution objects:
Added support()method for GEV-based distributions
(GEV(),GP(),Gumbel(),Frechet()). Added arandom()method for theTukey()distribution (using the inversion method).
distributions3 0.2.0
- Vectorized univariate distribution objects by Moritz Lang and Achim
Zeileis (#71 and #82). This allows representation of fitted probability
distributions from regression models. New helper functions are provided
to help setting up such distribution objects in a unified way. In
particular, apply_dpqr()helps to apply the standardd/p/q/rfunctions
available in base R and many packages. The accompanying manual page
provides some worked examples and further guidance.
- New vignette (by Achim Zeileis) on using distributions3to go from basic probability theory to probabilistic regression models.
Illustrated with Poisson GLMs for the number of goals per team in the
2018 FIFA World Cup explained by the teams’ ability differences.
(#74)
- New generic function prodist()to extract fitted
(in-sample) or predicted (out-of-sample) probability distributions from
model objects likelm,glm, orarima. (#83)
- Extended support for count data distributions (by Achim Zeileis):
Alternative parameterization for negative binomial distribution
(commonly used in regression models), zero-inflated Poisson, and
zero-hurdle Poisson. (#80 and #81)
distributions3 0.1.2
- Added a plotting generic for univariate distributions (@paulnorthrop, PR
#56)
- Added support for the Generalised Extreme Value (GEV), Frechet,
Gumbel, reversed Weibull and Generalised Pareto (GP) distributions
(@paulnorthrop,
PR #52)
- Added support for the Erlang distribution (@ellessenne, PR #54)
- Various minor bug fixes
distributions3 0.1.1
- Rename to distributions3for CRAN
distributions 0.1.0
- Added a NEWS.mdfile to track changes to the
package.
- Initial release