scimo: Extra Recipes Steps for Dealing with Omics Data

Omics data (e.g. transcriptomics, proteomics, metagenomics...) offer a detailed and multi-dimensional perspective on the molecular components and interactions within complex biological (eco)systems. Analyzing these data requires adapted procedures, which are implemented as steps according to the 'recipes' package.

Version: 0.0.3
Depends: R (≥ 2.10), recipes (≥ 1.1)
Imports: dplyr, generics, magrittr, rlang, stats, tibble, tidyr
Suggests: ggplot2, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2025-07-24
DOI: 10.32614/CRAN.package.scimo
Author: Antoine BICHAT ORCID iD [aut, cre], Julie AUBERT ORCID iD [ctb]
Maintainer: Antoine BICHAT <antoine.bichat at proton.me>
BugReports: https://github.com/abichat/scimo/issues
License: GPL (≥ 3)
URL: https://github.com/abichat/scimo
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: scimo results

Documentation:

Reference manual: scimo.html , scimo.pdf
Vignettes: Pediatric cancers (source, R code)

Downloads:

Package source: scimo_0.0.3.tar.gz
Windows binaries: r-devel: scimo_0.0.3.zip, r-release: scimo_0.0.3.zip, r-oldrel: scimo_0.0.3.zip
macOS binaries: r-release (arm64): scimo_0.0.3.tgz, r-oldrel (arm64): scimo_0.0.3.tgz, r-release (x86_64): scimo_0.0.3.tgz, r-oldrel (x86_64): scimo_0.0.3.tgz
Old sources: scimo archive

Linking:

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